Prochlorococcus marinus subsp. pastoris CCMP1986: PMM1289
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Entry
PMM1289 CDS
T00142
Name
(GenBank) Type II alternative RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
pmm
Prochlorococcus marinus subsp. pastoris CCMP1986
Brite
KEGG Orthology (KO) [BR:
pmm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PMM1289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmm03021
]
PMM1289
Transcription machinery [BR:
pmm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PMM1289
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
CAE19748
UniProt:
Q7V0G9
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All DBs
Position
complement(1240108..1241049)
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AA seq
313 aa
AA seq
DB search
MAASATTSTEPQKRRGNDPISWYLSNIGRVPLLTPAEEIELGNQVQKMMVLTEDGQLNEK
TKEFTPQDKRTIKIGRRAKERMMKANLRLVVSVAKKYQGKGLELLDLVQEGSLGLERAVE
KFDPTRGYKFSTYAFWWIRQSMTRAIACQSRTIRLPVHLSERLATIRKISRELAHKLGAM
PSRIEIAEAMEIDVEELDSVLRQALSTSSLDAPVNGDDGRSFLGDLIADSNNEEPLDQVE
QKMHQEQLGKWLSHLSEQEQHVLKLRFGLDGNERHTLAEIGRLLEVSRERVRQVELKALR
KLRNLTRKLPSGI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggctgcatcagcaacaacatcaactgaaccccaaaaaagaagaggtaatgaccctata
agttggtatctttcaaatataggtcgcgtccctttattaacacctgctgaagaaattgaa
ttgggtaaccaagttcaaaaaatgatggttctaaccgaagacggtcaactaaatgaaaaa
acaaaagaatttactcctcaagataaaagaactataaagattggaagaagagcaaaagag
agaatgatgaaagctaatttaaggttagtagttagtgttgcgaaaaaatatcaaggtaaa
ggactagaacttttagatcttgttcaagagggttctttaggtttagagagagcagtcgaa
aagtttgaccctacaagaggatataagttttctacttatgccttttggtggattcgtcaa
agtatgaccagagctattgcctgccaatccagaactattcgtttaccagttcatttaagt
gagaggcttgccactataagaaaaataagtagggaattagctcataaacttggagcaatg
ccaagtagaattgaaattgcggaagcaatggaaatagatgtagaagaactggattctgta
ttgagacaagctctatctacaagtagtttggacgcacctgtaaatggagatgatggtagg
agtttcttgggtgaccttattgcagacagtaataatgaagaacccctggaccaagttgag
caaaagatgcatcaagagcagttaggaaagtggttaagtcacttaagcgaacaagaacaa
catgttctcaagttaagatttgggttagatggaaatgagagacatacattagcagaaata
ggtaggttattagaagtctctagagaaagagtaagacaagtggaacttaaggctcttaga
aaattaagaaacttaactagaaaattacctagtgggatttaa
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