Prochlorococcus marinus subsp. pastoris CCMP1986: PMM1347
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Entry
PMM1347 CDS
T00142
Symbol
truB
Name
(GenBank) Putative tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmm
Prochlorococcus marinus subsp. pastoris CCMP1986
Brite
KEGG Orthology (KO) [BR:
pmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmm03016
]
PMM1347 (truB)
Enzymes [BR:
pmm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PMM1347 (truB)
Transfer RNA biogenesis [BR:
pmm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PMM1347 (truB)
Prokaryotic type
PMM1347 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CAE19806
UniProt:
P59882
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All DBs
Position
1297563..1298480
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AA seq
305 aa
AA seq
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MEIKDGFIAINKEKGFTSHDCVKQIRKLLGIKKVGHTGTLDPDVTGTLPIAIGSATRFIQ
YLPQGKTYIGQIQLGIRTKTDDMQGEILNKKDWPVLSHKQLDKYLNNFRGIIQQVPPIVS
SVHVNGERAYKKAFKNEEFELKPKEVEIEELVLNKWDQINGILEIKVSCSSGTYIRSIAR
DLGGSLDSEGCLLKLKRISACGFHEKNSIKISDLSDNNDKNAPFIIPTISALDHISTLVL
ANQEEINFWQTGRIIKFDANNFVKSRSFDYKKPIKIIDPNKILLGIGFINEEKTILHPKL
VLNAK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaagatggatttatagcaataaataaagagaaaggatttacctctcatgat
tgcgttaaacaaataaggaaattattaggtatcaaaaaagttggtcacacaggtacttta
gatcccgatgtaacaggtactttaccaattgcgataggcagtgctacaagatttattcaa
tatttacctcaaggcaaaacctatattggccaaatccaattaggcataagaacaaaaact
gatgatatgcaaggcgaaattcttaacaaaaaagattggcctgttttgagccataagcaa
ttagataaatatttaaataacttcagaggtattatccaacaagtacctcctatagtatct
agtgttcacgttaatggagaaagagcatacaaaaaagcttttaaaaatgaggaatttgaa
ttaaaaccaaaagaggtagaaatagaagaattagttctaaacaaatgggatcaaataaat
ggaatattagaaataaaagtgtcttgttcctcaggaacttatataagatccatcgctaga
gatttgggcgggagcttagattctgagggttgtcttttgaaacttaaaaggatttcggct
tgtggattccatgagaaaaattctataaagatatctgatctaagtgataataatgacaaa
aacgcaccttttattattcccacaatttctgctcttgatcatatttcaacactagtttta
gctaatcaagaagaaattaacttttggcaaacaggaagaataattaaatttgatgctaat
aattttgttaaaagccgctcttttgattacaaaaaaccaataaaaattattgaccctaac
aaaatcctattaggaattggttttattaatgaagaaaaaactatattacatcccaaatta
gttcttaatgcaaaataa
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