Prochlorococcus marinus subsp. pastoris CCMP1986: PMM1584
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Entry
PMM1584 CDS
T00142
Symbol
rnd
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pmm
Prochlorococcus marinus subsp. pastoris CCMP1986
Brite
KEGG Orthology (KO) [BR:
pmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmm03016
]
PMM1584 (rnd)
Enzymes [BR:
pmm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PMM1584 (rnd)
Transfer RNA biogenesis [BR:
pmm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PMM1584 (rnd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
DNA_polI_exo1
PhoLip_ATPase_N
Motif
Other DBs
NCBI-ProteinID:
CAE20043
UniProt:
Q7UZS1
LinkDB
All DBs
Position
1514652..1515293
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AA seq
213 aa
AA seq
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MNNGEKNKKINFSHNDINTDLYNLYKDSSYLAVDTEAMGLIHGRDRLCLIQICNELNLTA
CIKIELNNSDSPNIKKLFEDKNIMKIFHYARFDVAALRCNLEINTRNIFCTKIASKLART
YTNKHGLKDLINELLEVELDKSSQSSDWGSLEDLSNKQIDYAANDVRYLIETMHKLKLIL
DREGRYELAQKCFKTIPVHSELDILKFSNIFEH
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaataatggtgaaaaaaataaaaaaataaatttttcccataatgatattaatactgat
ttatataatctttacaaggactcatcttatttagctgtagatactgaggcaatgggattg
atccatggaagagataggctttgtttaatacaaatatgtaatgaattaaatttgactgca
tgcataaaaatagaacttaacaactcagattcacccaatataaaaaaattatttgaagat
aaaaacataatgaaaatatttcattatgccagatttgatgtggcagctctaagatgtaat
cttgaaattaatacaagaaatattttctgtacaaaaatagccagtaaattagcaaggact
tacacaaataaacatggcttaaaagatttaatcaatgaattactagaagtagaattagat
aaaagttcgcaaagtagtgattggggaagcttggaagatttatctaataagcaaattgat
tatgctgccaacgacgttagatatttaattgagacaatgcacaaattaaagctgattctt
gatagagaaggaagatatgagttggctcaaaaatgttttaagactattccagttcattct
gaattagatatattaaaattctcgaatatatttgaacattaa
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