Prochlorococcus marinus subsp. pastoris CCMP1986: PMM1697
Help
Entry
PMM1697 CDS
T00142
Name
(GenBank) Type II alternative RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
pmm
Prochlorococcus marinus subsp. pastoris CCMP1986
Brite
KEGG Orthology (KO) [BR:
pmm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PMM1697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmm03021
]
PMM1697
Transcription machinery [BR:
pmm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PMM1697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Ant-IIb_sub-bd
Motif
Other DBs
NCBI-ProteinID:
CAE20156
UniProt:
Q7UZH0
LinkDB
All DBs
Position
1632707..1633726
Genome browser
AA seq
339 aa
AA seq
DB search
MGILLESGNSSSKKKTEEPRLPNTAGKTRKTKPSLTAKQNQKKSARLASDSIGYYLSSIG
RVPLLTAAEEIELAHHVQNMKKMLEIPEIERSSKHLRLIKIGKRARDRMMSANLRLVVSV
AKKYQNQGLDLLDLVQEGAIGLERAVDKFDPAMGYKFSTYAYWWIRQGMTRAIDNSARTI
RLPIHISEKLSKMRRVSRELSQKSGRQPTRLEMATAMGIEQKDLEDLISQSAPCASLDAH
ARGEEDRSTLGELIPDPNGEEPMEGMDRTIQKEHLGTWLTQLNEREQKIMKLRFGLDGEE
PLTLAEIGRQINVSRERVRQLEAKAILKLRVMTTHQKAA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggggatccttctggaatctggaaatagttcttcaaaaaagaaaactgaagaacctaga
ttaccaaacactgcgggcaagactcgcaaaacaaaaccaagcttaactgctaaacaaaac
caaaaaaaatctgcaagactcgcttcagattcaataggttattacttaagcagtattgga
agagttcctcttcttactgcagcagaagaaatagagctagctcatcatgttcaaaacatg
aaaaagatgctagaaattcctgagatagaaagatcatcaaaacatcttcgcctaattaaa
attgggaaaagagctagagatagaatgatgtcagccaatttaagacttgtagtatctgtt
gccaagaagtatcaaaatcaaggtttagatttattagacttggtacaagaaggcgctata
ggcttagaaagagcggttgataaatttgatcctgcgatgggatataaattttctacttat
gcttattggtggattagacaaggaatgacaagagctattgataatagcgctaggacaatt
agattaccaattcatattagtgaaaaactttccaaaatgagaagagtttccagagaatta
tctcaaaaatctggaaggcaaccaaccagattagaaatggcaacagcgatgggaattgag
caaaaagatttagaagacttaatctctcaaagtgctccatgcgcatctcttgatgctcac
gcaagaggcgaagaagatcgtagtaccttaggtgaacttattcccgatccaaatggagaa
gagcctatggaagggatggatagaacaatccaaaaagaacatttaggaacttggctgact
caattaaatgaaagagaacaaaaaattatgaaacttagattcggcttagacggagaggaa
cctcttacactggcagaaataggaagacaaataaatgtatccagagaaagagttaggcaa
ctagaagctaaggcaattttaaaacttagagtaatgaccactcatcaaaaagcagcctag
DBGET
integrated database retrieval system
