Prochlorococcus marinus NATL2A: PMN2A_1015
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Entry
PMN2A_1015 CDS
T00267
Name
(GenBank) DNA-directed RNA polymerase gamma chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pmn
Prochlorococcus marinus NATL2A
Pathway
pmn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PMN2A_1015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmn03021
]
PMN2A_1015
03400 DNA repair and recombination proteins [BR:
pmn03400
]
PMN2A_1015
Enzymes [BR:
pmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PMN2A_1015
Transcription machinery [BR:
pmn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PMN2A_1015
DNA repair and recombination proteins [BR:
pmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PMN2A_1015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
DUF333
Pkinase_fungal
DUF7337
Motif
Other DBs
NCBI-ProteinID:
AAZ58505
UniProt:
Q46J23
LinkDB
All DBs
Position
complement(1507841..1509748)
Genome browser
AA seq
635 aa
AA seq
DB search
MTNSNLRTENHFDYVKIKLASPERVMEWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGL
FCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVSHVWY
LKGIPSYVAILLDMPLRDVEQIVYFNCYVVLDIGDSKDLKYKQLLTEDEWLEIEDEIYAE
DSTIENEPIVGIGAEALKQLLEDLNLKEVAEQLREDIATSKGQKRAKLIKRLRVIDNFIA
TSASPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPE
IIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDY
SGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQKADDEVM
QVLQEVIEGHPILLNRAPTLHRLGIQAFEPKLVAGRAIQLHPLVCPAFNADFDGDQMAVH
VPLAIEAQTEARMLMLASNNILSPATGDPIVTPSQDMVLGSYYLTAIQPQSKQPKFGDYS
NTYASLEDVLQALEDKRIDLHDWVWVRFSGEIEDDDELQNPLKSETLKDGTRIEEWTYRR
DRLDEDGSLISRYILTTVGRVVMNHTIIDAVAATS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgactaatagcaatctacgtacggaaaatcattttgattatgtaaaaataaaattagca
tcgcctgaaagagtaatggagtgggggcaaaggactttgcctaatggtcaggttgtaggg
gaagtaactaagccagaaacaataaattatcgaacactaaagcctgaaatggatgggttg
ttttgtgaaaagatttttggtccgtccaaggattgggaatgtcattgtgggaaatataag
agggttagacatcgtggaattgtttgcgagaggtgcggtgttgaagtaacagaaagtcgg
gttaggagacatagaatgggatttattaaattagcagctcctgtatcacatgtttggtat
ctaaaaggtattcctagctatgtagctattttgttagatatgcctcttagagatgttgag
caaatcgtttactttaattgttatgtggttttagatattggagatagtaaagatttaaaa
tataagcagctattaacagaagatgaatggcttgagattgaagacgagatttatgctgag
gattcaactattgagaatgaacccatcgttggcataggtgcagaggccttaaaacaatta
cttgaagatttaaatttaaaagaagttgctgagcaattacgagaagatattgctacaagt
aaaggtcaaaaaagggctaagcttataaaaaggctaagggtaatagataactttattgct
acaagcgcaagtccagaatggatggttttagatgcgatacctgtaatacctcctgatttg
aggcctatggtgcaactagatggaggtagattcgctacctcagatttaaatgatttatat
agaagagtaatcaataggaacaaccgtcttgctcgtcttcaggaaatactagctccggaa
ataatagttagaaatgaaaaaaggatgctacaagaggctgtagatgcacttattgataat
ggtagaaggggaagaactgttgttggcgcaaataatcgccccttgaaatcattaagcgat
attatcgagggtaagcaaggtagatttagacagaatttgcttgggaaaagagttgattat
tcaggtcgctcggtaatagtagttggccccaagttaaaaatgcatcaatgtggattgcca
aaggaaatggcgatagaactttttcagccttttgtaattcatcgattgattcgccagaac
attgtcaataacatcaaagctgcaaagaaattgatacagaaagcagacgatgaagtaatg
caggtattacaggaagtcatagagggtcatcctatcctgcttaaccgtgctcctactttg
caccgattaggcattcaagcttttgaacctaaattagttgctggacgagctatacagcta
catccattggtatgtccagcttttaatgctgattttgatggagatcaaatggctgttcat
gtgcctttggcaattgaagcgcaaacagaagcaaggatgttaatgctagcgagtaacaat
attctttcccctgcaactggggatccaatagttaccccatctcaagatatggttttaggg
tcttactaccttactgcaattcagcctcaatcaaagcagccgaagttcggagattattca
aatacctatgcatcacttgaggacgttttacaagctcttgaagataaaagaatagattta
catgattgggtttgggttcgattttctggtgaaattgaggatgacgatgagcttcagaat
ccgcttaagtcagagactttgaaagacggtacccgtattgaggaatggacatatcgacgt
gaccgattagatgaagatggaagtttaattagccgttatatattgactactgttggtcga
gtcgtaatgaaccatacaattattgatgccgtagcagccacctcgtaa
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