Prochlorococcus marinus NATL2A: PMN2A_1250
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Entry
PMN2A_1250 CDS
T00267
Name
(GenBank) Conserved hypothetical protein MG423
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
pmn
Prochlorococcus marinus NATL2A
Pathway
pmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMN2A_1250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmn03019
]
PMN2A_1250
Messenger RNA biogenesis [BR:
pmn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PMN2A_1250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
RMMBL
RNase_J_C
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
AAZ58740
UniProt:
Q46ID8
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All DBs
Position
complement(1754664..1756598)
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AA seq
644 aa
AA seq
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MNSQGSKNNQTKSPCLRIIPLGGLGEIGKNTCVFEYGDDIMILDAGLAFPTDGMHGVNVV
MPDTTYLRENQNRIRGLVVTHGHEDHIGGISHHLKNFNIPIVYGPPLAMSMLRGKMEEAG
VADRTTIQVCGPREVIKVGQHFSVEFVRNTHSISDSYSFAVTTPVGVVFFTGDFKFDHTP
PDGQPADLARMAHYGDKGVLCLLSDSTNSEVTGFTPSEYSVFPNLDRYIATAEGRVMVTT
FASSTHRVAMLLELAMKNGRKVGLLGRSMLNVVGKARELGYMRFPDDLFFPIKQIRDLPD
RETFLLMTGSQGESMAALSRIARGEHQHVQLKTSDTVIFSASPIPGNTISVMHTIDKLIK
LGAKVIYGKDKGIHVSGHGCQEDQKWMLGLTRPKYFIPVHGEYRMQVLHGKTAVSMGVHP
ENVLVMENGDVAELRPDSLLQGSPVKSGVELLDSSRTGIVDTRVLKERQQLADDGVITVL
TPISTDGVMVAPPRVNLRGVITNVDAKTMVNWTEREINWVLENRWKQLVLKTGGKSVEVD
WIGLQREVESGLSRRLRREVQAEPLVLCLVQPAPGGTRAYKPQLDQQPDSRQVVKKTADK
APKTTKASVANQETSSPAEQKTNTEPNAEEMPTGRTRRRRSAIS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaattctcaaggttcaaaaaataatcaaaccaaatctccttgtttgaggattattccc
ttaggcggcctcggagaaatcggtaaaaatacttgcgtctttgaatacggagacgacatc
atgattcttgatgctggtcttgctttcccaactgatgggatgcatggagtaaatgttgtc
atgccagacactacttatctacgagaaaatcaaaatcgaataagaggtttggtggttact
catgggcatgaggatcatattggtggaatttctcatcatttaaagaactttaatattcca
attgtttacggccctcccctcgctatgtctatgctgagggggaaaatggaggaagctgga
gttgctgatcggacaacaatacaagtatgtggaccaagagaagttattaaagttgggcaa
catttttcagttgaatttgtaagaaatacacattcaatttctgatagttattcctttgca
gttacgactccagtgggagtagtatttttcactggagattttaagttcgaccatacccca
cctgacggacagcctgcagatttagccaggatggctcactatggagataaaggtgttctt
tgccttctatctgattcaaccaactctgaagttacaggattcacgccctctgaatattct
gtttttccaaatttagatagatacattgctactgctgaaggcagagttatggttactact
tttgctagttcaactcatcgtgtagcgatgcttttggagctagcaatgaaaaacggtaga
aaggttggcttgctaggtcgttcaatgctgaatgtggttggtaaggcaagggaacttggt
tatatgcgttttcctgatgatttattttttcctattaaacagatcagagatttgcctgat
agagagacttttttattgatgacaggtagtcaaggagaatcaatggctgctttaagccgt
attgctagaggcgagcatcaacatgttcaattgaaaactagtgatactgttattttttct
gctagccctattcctgggaatactatttctgtgatgcatacgattgataaattaatcaaa
ctgggtgcaaaagtaatttatggcaaagataaggggattcatgtttcaggccatggatgc
caagaagatcaaaaatggatgcttggattaacaagacctaaatacttcattcctgttcat
ggtgagtacagaatgcaagttttacatgggaaaactgctgtctcaatgggggtgcatcca
gagaatgtattggtgatggaaaatggggacgttgctgaattaagaccagattctctattg
caaggctcaccagttaaatctggagtggaattactcgattcttctagaacagggattgtg
gatactcgagtattaaaagaacgtcagcaacttgctgatgatggagttattaccgttctt
actccaattagtactgatggggtgatggttgcaccacctagggtaaatcttcgtggtgtt
atcactaatgttgatgccaaaaccatggttaattggactgaaagagagattaattgggtc
ttagaaaatcgatggaaacagctcgttcttaagaccgggggaaaatcagttgaggtcgat
tggataggattgcaaagagaggttgaatcaggattatctcgtcggttgagaagagaggtt
caagcggagcctttagttctttgccttgttcaacctgctccaggaggaactcgcgcatat
aaacctcaacttgatcaacagccagattcacgacaagtagttaagaaaactgctgataaa
gcccctaagacgacaaaggcatccgtagcaaatcaagaaacaagttcaccagcagaacaa
aaaacaaatacggaacctaatgctgaggaaatgcccacaggaagaacaagacgtcgcaga
tcagcaattagctga
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