Prochlorococcus marinus NATL2A: PMN2A_1705
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Entry
PMN2A_1705 CDS
T00267
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pmn
Prochlorococcus marinus NATL2A
Pathway
pmn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PMN2A_1705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmn03400
]
PMN2A_1705
Enzymes [BR:
pmn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PMN2A_1705
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PMN2A_1705
DNA repair and recombination proteins [BR:
pmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PMN2A_1705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AAZ59193
UniProt:
Q46H41
LinkDB
All DBs
Position
complement(376092..376940)
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AA seq
282 aa
AA seq
DB search
MPELPEVETVRKGLEKLLNDFYIERIEVLKERSIASNGGSKSFIVSVKNSYLGSWERRGK
YLIGSLLTKEKFSKGFLVVHLRMTGQFKLLEKEVLACKHTRVRFFDERGRELRFIDIRNF
GQMWHVPSSRSIPEIVSGIKRLGPEPFSDDFNSHYLEEYLKKKTRSIKSALLDQETVAGV
GNIYADETLFDAGINPKKESRNLKSTELKRLCNSLVKILNISIGEGGTTFSDFRDLEGIN
GNYGGQAWVYRRSGKNCKKCGEKILREKICGRSTHWCPNCQK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
ttgccagaattacctgaagttgagacagttagaaaaggacttgagaaacttttaaatgat
ttttatattgaaagaatagaagtattaaaagagcgatcaatagcaagtaatgggggatca
aaaagtttcatagttagtgttaaaaatagttatttgggtagttgggaaagaagaggtaaa
tatttaataggatccctgcttacaaaagaaaaatttagcaaaggttttttagttgttcac
ttaagaatgacaggccaatttaaattacttgagaaagaagttttagcatgcaagcatacg
agagtgagattttttgatgagagagggagagaactccgttttatagatattaggaatttt
gggcaaatgtggcacgtgccctcgtcaagatcaattccggagatagtatctggaattaaa
agattaggcccagagccatttagtgatgattttaatagtcattatttagaagaatatttg
aagaaaaaaactcgctcaattaaatctgctttattagatcaagaaactgttgctggagtt
ggaaatatctatgcagatgaaacattatttgatgcagggattaatccaaaaaaagaaagt
agaaatttaaaaagtactgaattaaaaaggctttgcaatagtctggtcaaaattttaaat
ataagtattggagagggaggcacaacttttagtgactttagagatttagagggaattaat
ggaaattatggcggacaagcttgggtatatagacgaagcggtaaaaattgtaaaaaatgt
ggagaaaagatattgcgagaaaagatctgtggaaggagcacacactggtgtcctaattgc
caaaaataa
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