Petrotoga mobilis: Pmob_0083
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Entry
Pmob_0083 CDS
T00621
Name
(GenBank) RNA binding metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pmo
Petrotoga mobilis
Pathway
pmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pmob_0083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmo03019
]
Pmob_0083
Messenger RNA biogenesis [BR:
pmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pmob_0083
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DUF4407
KhpA-B_KH
DUF948
Motif
Other DBs
NCBI-ProteinID:
ABX30832
UniProt:
A9BEV4
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All DBs
Position
79921..81474
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AA seq
517 aa
AA seq
DB search
MEILVYIIIGIAIFILSLLVGINIGNRRMISTLATKKEELEVEIKNKQKEIEKMLKNAEE
EAKALKQKELLEAKEEIHRLRQEFDSEAKQQREELKANEERLIRKEESLAKKEENLEKLK
EKLEVQHENVLKLEKELETKLNEIAKMTEEEARQVVINEARDKYEREIAQKFKEIKDHYE
EESKKYARWVITTAIQRYASDVTNEITTSTVALPTDDMKGRIIGREGRNIRTFEKLTGTD
LIIDDTPEIVVISSFNPLRREIAKRTLEMLVADGRIHPARIEELYEKSKNEIQEYIKEVG
KEAVMRVGIKQPHLEIIKLLGRLKFRTSYGQDVLEHSIEVAQFAGMMASELGLNVELAKR
AALLHDLGKAVDHEVEGSHAIVGGQIAKRYGEKLEVVNAIQYHHNEVDPMTPEAVLVAAS
DALSASRPGARKETLENYIRRIEQLEEIAKSFRYVDKAYAIQAGRELRIIVQPDKVEDEI
AEKLAHDISVQIEEKVQYPGVIKVTVIREKRSISYAS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttggaaattctggtatatataattataggaatagctatatttatcttatctctgcttgtt
ggaattaatattggaaatagaaggatgatctccacactagcaaccaaaaaagaagaattg
gaagttgaaataaaaaacaaacaaaaagaaatagaaaagatgttaaaaaatgcagaagaa
gaagctaaggcattaaaacaaaaagaattacttgaggcaaaagaagagatacataggctc
aggcaagaatttgattcagaagcaaagcaacaaagagaagaacttaaagccaatgaagag
agattaattagaaaagaagaaagcttagcaaaaaaagaagagaatttagaaaaactaaaa
gaaaaattggaagtccagcatgaaaacgtcttgaaattggagaaagaattagaaactaaa
ttaaatgaaattgcaaaaatgaccgaagaagaagcacgtcaagtagtaataaacgaagca
agggataaatatgaaagagaaattgcccaaaagttcaaagaaataaaagatcattacgaa
gaagaatcaaaaaaatacgccagatgggttatcactactgctattcaaagatatgcatca
gatgtcaccaacgaaataacaacctcaaccgtagctttgcccacagatgacatgaaagga
agaataataggtagagagggaagaaacatcagaacttttgaaaaactcacaggtaccgat
ttgataattgatgataccccagagatagttgtaatctcatcgttcaacccattacgaaga
gaaatagcaaaaagaacacttgaaatgcttgtagccgatggaagaatacatcctgctaga
atagaagagctctatgagaaatcaaaaaatgaaatccaagaatacataaaagaagtagga
aaagaagcggtaatgagagtaggtataaaacagccgcaccttgaaataattaaacttcta
ggtagattaaaatttagaaccagttatggacaagatgtattggaacattcaatagaagta
gcacaatttgctggaatgatggcaagtgaattaggattgaacgttgaactagctaaaaga
gcggctttattacatgatttaggaaaggctgtggatcatgaagttgaaggatcacacgct
attgttggagggcaaattgctaagagatacggagaaaaattggaagttgttaatgctata
cagtatcaccacaatgaagttgacccaatgacacccgaagctgttttagttgctgcaagt
gatgcgttatcggcatccaggcctggtgcacgtaaagaaactctggaaaattacattcga
agaatcgagcaacttgaggagatcgcaaaatcattcagatacgttgataaagcttatgca
atacaagcaggaagagaattgagaataatagttcaaccagataaagttgaagatgaaatc
gcagaaaaattggcacacgatatatctgttcaaatagaggaaaaggttcaatatcctggt
gtaatcaaagtaaccgtaattagagaaaaaagaagcatatcttatgcaagttag
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