Petrotoga mobilis: Pmob_0084
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Entry
Pmob_0084 CDS
T00621
Name
(GenBank) exonuclease sbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pmo
Petrotoga mobilis
Brite
KEGG Orthology (KO) [BR:
pmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmo03400
]
Pmob_0084
DNA repair and recombination proteins [BR:
pmo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pmob_0084
Archaeal homologous recombinant proteins
Pmob_0084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
TsaE
DUF5082
ABC_tran
AAA_28
AAA_19
Pept_S41_N_bact
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABX30833
UniProt:
A9BEV5
LinkDB
All DBs
Position
complement(81513..84632)
Genome browser
AA seq
1039 aa
AA seq
DB search
MKPIKLKFQAFGPFLEEQEIDFNKLRNDTLFLITGPTGAGKTTIFDAICYALYGNGSMDE
RGDAIARSHFADENTDTYVEFEFQFKDKIIEVSRTPSYERSKKDGEGTTKQNSQASIKIY
QNGELILHETGVKKVNSKVEEYLGLNYEQFKQIVMIPQGEFRKFITANSNERAEIFKKIF
DISIYERFEQKIDEIFKNIEKGLKEQQQKVRNILETINLESEEYKQLLKEENIDPENLID
QLTKEIKKRETSKEETEKQKSQKQDKLQKLNTNLEKIKKTNELIEKKETLKKEIEELQQN
SKYIQEREELLNRLKKAKEILPYEERYVEYLKELNDKKNQLKDQQDILDKSMEEKQRIDE
KLPEIEKQYQKISAVEKEIEDLNQKLDKYVEYKNLIKEYNTKKKLLDEKVKESQEKDKEL
SETQGKLEQNEKYISENEDINVEILKNEINTNEKLLSAANELSKNYEELALLHKDYKKVK
KQKEEIEIEIQNLREEQNKKTTDFIKSQAYHLATTLKEGEPCPVCGSLVHPSPAKSSGKL
ITEKELEEINQKLNEKEKEKAMILRNYEDVSNKYSQEVSLFKSEYKRICEELQIPQESEY
IYTHIQNLIKILEDRLNQQKQEYGQKIKIYNKVKSLKNDNKKIKEEIKELEEQRENLRKI
IDESRSKIIELETKITNLKEQLENKTENEIKSEIQEKRKFIHNIKTTYEQKREEANRISE
IINSSKGTIKTLTEDITKLDDQVKNAEQKFDQMVEKMGFKNQQEYKILKEQINLIETLED
EVQKYKEELKNKQTLLIDLEESTKNLKKIDETPIANEIDQLQKEIEELIKNETNLEYEIK
HLKGTKTNLETVIKEIEKQEKEYSTIKNLRDVSKGDNNTRISLSKYVLAYYFEEILAQAN
LRLNKLTDGRYHLHRSSKVLDARKSEGLEIMVFDIYTGKEREIKTLSGGESFKAALALAL
GLADVVQSEAGGISLDTIFIDEGFGSLDTNSLDSAIEVLTELNSTGRMVGIISHVSELKE
RIKSKIEVIPGKTGSYIKF
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaataaaattaaaattccaggcatttggaccttttttggaagagcaagaaata
gattttaacaaattaagaaacgatactttattcttaattacaggtccaacaggtgcagga
aaaactactattttcgacgctatctgttatgccttatacggaaatggttcgatggatgaa
agaggagatgcgatagccaggtctcattttgcagatgaaaacaccgacacatacgtggaa
tttgaatttcaatttaaagataaaataatcgaagtctcaagaaccccttcttacgaaaga
tccaaaaaagatggtgagggtaccacaaagcaaaacagtcaagctagtataaaaatatat
caaaatggtgaattgatattacacgaaactggggttaaaaaagtaaatagtaaggtagaa
gaatatttaggccttaactatgaacaattcaagcaaatagtgatgattccccaaggagaa
ttcagaaagtttataacagccaattcaaatgaaagagcggagatctttaagaagatattt
gacataagtatatatgagcgcttcgaacaaaaaatagacgagatttttaaaaatatagaa
aaaggattaaaagaacaacaacaaaaagtcagaaacatattagaaacaataaaccttgaa
tcagaagaatacaaacaattgttgaaagaagaaaatatcgatcctgaaaatctaatcgat
caattaacaaaggaaattaagaaaagggaaacttcaaaagaagaaaccgaaaaacaaaaa
tctcaaaaacaagacaaactgcaaaaactaaatacaaatcttgaaaagataaaaaaaacc
aatgaactaatcgaaaagaaagagacccttaaaaaagagattgaagaactccaacaaaat
tccaagtatatccaagaaagagaagaactccttaacaggttaaaaaaggcaaaagagata
cttccatacgaagaaagatacgtagagtatttgaaagaattaaacgataaaaagaaccaa
ctcaaagatcaacaagatatattagataaaagtatggaagaaaagcaacgaatagacgaa
aaattaccagaaattgaaaagcaatatcaaaagatatccgcagttgaaaaagaaattgaa
gatctcaatcaaaaattagataaatacgttgagtacaaaaacttaataaaagaatacaat
accaaaaagaaactcttggatgaaaaggttaaagaaagccaagaaaaggacaaggaactt
tcggaaactcaaggaaaattggaacaaaacgaaaaatatatatcagaaaacgaagatata
aacgttgaaatacttaaaaacgaaattaatacaaatgaaaaattattatctgcagccaac
gaattatccaaaaactacgaagaattggcactcttacacaaagattataaaaaagtaaag
aagcaaaaagaagaaatagagatagaaatccagaacttaagggaagaacaaaataaaaag
actaccgattttataaaatcacaggcatatcatctcgcaactactttaaaagaaggagaa
ccgtgtcccgtttgtggatctcttgttcacccttctcctgccaaaagtagtggaaaatta
ataacagaaaaagaactagaggaaatcaatcaaaaattaaatgaaaaagagaaagaaaag
gcaatgatactaagaaattacgaagatgtatcaaacaaatattcacaagaggtatcttta
tttaaatcggaatacaaaagaatctgtgaagaactacaaatcccccaagaaagcgagtat
atatacactcatatacaaaatttaataaaaatactcgaagatagattaaaccaacaaaaa
caagaatatggccaaaaaataaaaatatacaataaagtcaaatccctaaaaaacgataat
aaaaagatcaaagaagaaattaaagagctagaagaacaaagagaaaatttgagaaaaatt
attgatgaatcgagatcaaaaattatagaactagaaactaaaatcacaaatctcaaagaa
caattagagaacaaaactgaaaatgaaataaaaagcgagatacaagaaaaaagaaaattt
atccataatatcaaaactacttacgaacaaaaaagagaagaagctaacagaatctcagaa
ataataaactcttcaaaaggaacaataaaaacattaaccgaagacataactaaattagac
gaccaagtaaaaaatgctgaacaaaaattcgatcaaatggtagaaaaaatgggatttaag
aatcaacaagaatataaaatactgaaagaacaaattaacttaatagaaactttagaagat
gaagttcaaaaatataaagaagaattaaagaataagcagactcttctcatcgatttagaa
gaatccactaaaaaccttaaaaaaattgatgaaactcctatagcaaatgaaatagatcaa
ttacaaaaggaaattgaagaattaatcaaaaatgaaacaaatttagaatatgaaataaag
catcttaaaggcacaaaaactaatttagaaactgtcataaaagagatagaaaaacaagaa
aaagaatactcaaccataaagaacttaagagatgtcagtaaaggtgacaacaatacaagg
atcagccttagtaaatacgtgctagcctattatttcgaagaaatattagctcaagcgaat
ctaagattaaacaaattaacagatgggagatatcatttgcatagatcttctaaggtactt
gatgcaaggaagagcgaaggtttagaaatcatggtttttgatatctacactggaaaagaa
agagaaataaaaacactttcaggaggagaaagttttaaagctgcactagctcttgcttta
ggattagccgatgtggtgcaaagcgaagctggtggtatttctttagatacgattttcata
gatgaaggatttggcagccttgatacaaactctcttgatagtgcaatcgaagtattaacg
gagctaaacagcactgggagaatggtgggtataatatctcatgtaagtgaattgaaagaa
agaattaaatcaaaaatcgaggtaataccaggaaaaactggtagctacataaagttttga
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