Petrotoga mobilis: Pmob_0948
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Entry
Pmob_0948 CDS
T00621
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pmo
Petrotoga mobilis
Pathway
pmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pmob_0948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmo03019
]
Pmob_0948
03009 Ribosome biogenesis [BR:
pmo03009
]
Pmob_0948
Enzymes [BR:
pmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pmob_0948
Messenger RNA biogenesis [BR:
pmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Pmob_0948
Ribosome biogenesis [BR:
pmo03009
]
Prokaryotic type
rRNA helicases
Pmob_0948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
CMS1
AAA_22
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ABX31670
UniProt:
A9BJS7
LinkDB
All DBs
Position
1005574..1007166
Genome browser
AA seq
530 aa
AA seq
DB search
MTKFQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIP
LIERLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKR
RVDLVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMILSKTNKEKQIL
MFSATMPQRIVTLARKHMGNFETVTTVQENKEDITVKKAKQIYYMISESNKIELLSRLID
IDTNFYGLVFTKTKVQSEEIANELIKKGYEAEALNGDVSQNQRERIMDRFKSKRIKILIS
TDVAARGIDIDNLKYVINYSLPQNPENYIHRIGRTARAGNEGTAITFVTPTEYRRFMFIK
HSSKAIIEEAKIPQAKDIVNAKVEKIKDEIKSNLAKDIDPIYEILAETILEETDQEPSQI
IASILKYFYGGILKEENYNKIKEVKNSSKSKDQRLFVALGSSSKMTPKKLAEFIERETGV
TIKKIKDIQVMEKFSFVTVPSEQAEAIIEIFKQKSNRKRPLVVQAKSKRN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatttcaacaaatgggcctttctgataacatactcagcgcgattgatagaaaa
gggtacgaagcaccaactcctatccaagaaaaggttatcccccttcttttatctggtaag
aataatgtaatcggtcaggctcaaactggtacaggaaaaactgcagcatttggtatacct
ctaattgaaagattagacgaaaaagcaaacgacgttcaagctttagtattaacacccacg
agagagttagctttgcaggtttgtaacgaaatcgactcattgaaaggaaacaaaagattg
aatcttcttcccgtgtatggaggggtctcaattggaaatcaaattagagcccttaagaga
agagttgatttagtagtaggtacacctggaagaataatagaccatttgaacagaggtact
ttagatattactaaaatcaagtatttagtcattgatgaagccgatgaaatgttagatatg
ggttttatagaagatgtggagatgattctctcaaaaactaataaagaaaagcagattttg
atgttttcggctacgatgcctcaaaggattgttaccctcgctagaaagcatatggggaat
tttgaaacggtaacaaccgttcaagaaaacaaagaggacataactgtaaagaaggcaaaa
caaatttattacatgatttctgagtctaataaaatagaacttttgagtaggcttatagat
atagacactaatttttacggtcttgtatttactaaaacaaaagtccaatcagaagaaatt
gcaaatgaattaatcaaaaaaggttacgaagcagaagctttaaatggagatgtctctcaa
aatcaaagagaaagaataatggatagatttaagagcaaacgaataaaaattttaatatcc
acagatgttgcagccagaggtatagatatagacaatcttaaatacgtgatcaattattct
cttccacaaaatccagaaaattacatacaccgtataggaagaactgcgagggctgggaat
gagggtacagctattacttttgtcacaccaacagagtacagaagatttatgttcatcaag
cattcttcaaaagccataatagaagaagctaaaataccacaagctaaagatattgttaac
gcaaaagttgaaaaaataaaagatgagatcaaatctaatcttgccaaagatatagatccc
atttatgaaatcttggcggaaacaatcttagaagaaactgatcaagagcctagccaaata
attgcttctattttaaagtatttttatggcggaatcttgaaagaagaaaattataacaaa
ataaaggaagttaaaaattcttcaaaaagcaaggaccaacgattgtttgttgcattaggt
agttcaagcaaaatgacaccgaaaaagcttgctgaatttatcgaaagggaaactggtgta
accattaaaaaaataaaagatatacaagtaatggaaaaattttcttttgtaacggttcct
tctgaacaagctgaagcaataatagagatatttaagcaaaaatcaaatagaaaaagacca
cttgtagtacaagctaagtccaaaagaaattag
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