KEGG   Passer montanus (Eurasian tree sparrow): 120495735
Entry
120495735         CDS       T07277                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03013  Nucleocytoplasmic transport
pmoa04141  Protein processing in endoplasmic reticulum
pmoa04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120495735 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120495735 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    120495735 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmoa03019]
    120495735 (SEC13)
   04131 Membrane trafficking [BR:pmoa04131]
    120495735 (SEC13)
Messenger RNA biogenesis [BR:pmoa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120495735 (SEC13)
Membrane trafficking [BR:pmoa04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    120495735 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    120495735 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    120495735 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_Gbeta Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_NOL10_N Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR41 Beta-prop_Vps41 NBCH_WD40 WD40_RFWD3 MIOS_WD40
Other DBs
NCBI-GeneID: 120495735
NCBI-ProteinID: XP_039551491
LinkDB
Position
Unknown
AA seq 306 aa
MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNIL
ASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLSY
TGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGGCDNLVKIW
KEEEGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNSWSP
KLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACISDVNKGQGGVSAVTE
GQQNEQ
NT seq 921 nt   +upstreamnt  +downstreamnt
atgatccacgacgcccagatggattactacggcacgcgcctggccacctgctcctccgac
cgctccgtcaagatcttcgacgtgcgcaacgggggccagatcctcatcgccgacctcagg
gggcacgaaggtcccgtgtggcaggttgcctgggctcatcctatgtatgggaatatcttg
gcttcctgttcctatgacaggaaggttattatctggaaggaagaaaatggcacttgggaa
aagacctacgagtacacgggacatgattcttcagtgaattctgtctgctgggcaccacac
gactatggactgatcctggcctgcggcagctctgacggggccatttccttgttgagctac
acgggtgatgggcagtgggaagtcaaaaagatcagcaatgcacacacgattggatgtaat
gcagttagctgggctcctgctgttgtaccaggaagccttatagaacaaccctctggtcaa
aagccaaactacatcaaaagatttgcatctggtggctgtgacaacctggtcaagatctgg
aaggaagaagagggtcagtggaaagaagagcagaagctggaggctcacagtgactgggta
cgagacgtggcctgggctccctccatcggtttgccaaccagcaccattgctagctgctct
caggatggccgagtgtttatctggacctgtgatgatgcctctggaaactcctggtcacca
aagctgctgcacaagttcaatgacgttgtctggcacgtgagctggtccatcactgccaac
atccttgcagtgtctggaggagacaacaaagtgacactgtggaaggagtcggtggacggg
ctgtgggcgtgcatcagcgacgtgaacaagggccaaggaggggtgtctgctgtgacagaa
gggcagcagaacgagcagtga

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