Passer montanus (Eurasian tree sparrow): 120496178
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Entry
120496178 CDS
T07277
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120496178 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120496178 (EXOSC5)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120496178 (EXOSC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120496178
NCBI-ProteinID:
XP_039552298
LinkDB
All DBs
Position
Unknown
AA seq
221 aa
AA seq
DB search
MAVEPEAADAQCRLRPFSCELGLLSRPDGSAAFLQGDTSVLAGLYGPAEAKLSKELPDRA
ALEVLLRPKVGLPGVLERSREQLLRQTCEAAVLGALHPRTAVSLVLQVLSDAGSLLSCCL
NAACMALLDAGLPLAALFCGVTCALQPDGAILLDPTARQEQEARAVLTFAIASSDRKVLT
ATTKGSCSVEEMQQCLAAAQRAAGTIFQFYRDSVRRRYSKC
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagccggaggcggcggacgcgcagtgccggctgcggcccttctcctgcgag
ctggggctgctctcgcggcccgacggctcggccgccttcctgcagggggacacctcggtg
ctggccgggctctacggccccgccgaggccaagctcagcaaggagctgccggaccgcgcg
gcgctggaggtgctgctgcgccccaaggtggggctgccaggcgtgctggagcgcagccgg
gagcagctgctgcggcagacgtgcgaggccgccgtgctgggcgcgctgcacccgcgcacc
gccgtctccctggtgctgcaggtgctcagcgacgccggctctctgctgtcctgctgcctg
aacgccgcctgcatggcgctgctggacgcggggctgcccctggccgccctcttctgcggg
gtcacctgcgccctgcagcccgacggcgccatcctgctggaccccacggcccgccaggag
caggaggcacgcgccgtcctcaccttcgccatcgccagcagcgacaggaaggtgctgacg
gccaccaccaagggcagctgctccgtggaggagatgcagcagtgcctggccgcggcccag
cgcgccgccggcaccatcttccagttctaccgcgactccgtgcggcgccgctactccaag
tgctga
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integrated database retrieval system