KEGG   Passer montanus (Eurasian tree sparrow): 120496178
Entry
120496178         CDS       T07277                                 
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120496178 (EXOSC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmoa03019]
    120496178 (EXOSC5)
Messenger RNA biogenesis [BR:pmoa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     120496178 (EXOSC5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 120496178
NCBI-ProteinID: XP_039552298
LinkDB
Position
Unknown
AA seq 221 aa
MAVEPEAADAQCRLRPFSCELGLLSRPDGSAAFLQGDTSVLAGLYGPAEAKLSKELPDRA
ALEVLLRPKVGLPGVLERSREQLLRQTCEAAVLGALHPRTAVSLVLQVLSDAGSLLSCCL
NAACMALLDAGLPLAALFCGVTCALQPDGAILLDPTARQEQEARAVLTFAIASSDRKVLT
ATTKGSCSVEEMQQCLAAAQRAAGTIFQFYRDSVRRRYSKC
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcggtggagccggaggcggcggacgcgcagtgccggctgcggcccttctcctgcgag
ctggggctgctctcgcggcccgacggctcggccgccttcctgcagggggacacctcggtg
ctggccgggctctacggccccgccgaggccaagctcagcaaggagctgccggaccgcgcg
gcgctggaggtgctgctgcgccccaaggtggggctgccaggcgtgctggagcgcagccgg
gagcagctgctgcggcagacgtgcgaggccgccgtgctgggcgcgctgcacccgcgcacc
gccgtctccctggtgctgcaggtgctcagcgacgccggctctctgctgtcctgctgcctg
aacgccgcctgcatggcgctgctggacgcggggctgcccctggccgccctcttctgcggg
gtcacctgcgccctgcagcccgacggcgccatcctgctggaccccacggcccgccaggag
caggaggcacgcgccgtcctcaccttcgccatcgccagcagcgacaggaaggtgctgacg
gccaccaccaagggcagctgctccgtggaggagatgcagcagtgcctggccgcggcccag
cgcgccgccggcaccatcttccagttctaccgcgactccgtgcggcgccgctactccaag
tgctga

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