Passer montanus (Eurasian tree sparrow): 120496193
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Entry
120496193 CDS
T07277
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmoa03036
]
120496193 (TDRD12)
Enzymes [BR:
pmoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
120496193 (TDRD12)
Chromosome and associated proteins [BR:
pmoa03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120496193 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
EF-hand_3
EFhand_Ca_insen
KH_PARP14_6
Motif
Other DBs
NCBI-GeneID:
120496193
NCBI-ProteinID:
XP_039552341
LinkDB
All DBs
Position
Unknown
AA seq
1247 aa
AA seq
DB search
MEVVVLKVEDPSCFWIAVKECVPGVVGETVYENMNAEMDQFYSSSKDAEEVKQEEIKKGQ
VYGVFSEELKCWCRAQVESVRCQADGYQLGCFLVDYAKYCSVPAENIRVLAGAFAKIPDR
AKKCRLHCTRPLTLHIDYCENTAKIGPAKRWDTAAIHHFRKLLEEATEVKATIQTVEDKV
LEVFLFVTIRDEKICVNDDLVAKHFARYKEDEGTAGSSSDVSDDEVSFNAECVPVEFVGP
TFLARPKLPFGEEVSPHLGPGLAGCNSVLEKPSRRSHTDLNDNTVPVVSMVPGLPPKEDK
AVQTERLPQFLNSNFLQAHTVEDDQQTLQNVGKEKNFVFLSKKIEPSSLLETAPLFDGLK
KELAWNKFSGPTFTQSYCWPPVAGGCDVVAISHQGNDPLLYIPPVLTLLQESDYEALPSM
SGPLALILCPGWKKAQLVFDLLKTYRKGCRHLHPMLIILGQNKEAASQMEIRGEVVVTTP
HNLLRLLEHNTGLLCRLCHLVLDEVDVLFSDTCEQVFTILDCYKKATAQAQGNLPHQIIA
VGTQWNKHITPLIKEFMHDPHIVITVIEEAAIFGNVQQVVQPCMNSNRTAELLKILDFTQ
RNHQKVLVFTDSATEVEMIHKALKSNSIVSLKKHKESKCNAKCVLERWRKMHSSGTPAVL
VLADDCLQSLGITDATWVIHFSFPSPAVFGQRLQSMSDNFNPDIKDSAVDEEDLKAKSVI
LLTESSSCHAPGILYYLEHAEVEIPEELYDLTARVQESEEDETFSRPLCAALKTFGLCRN
RTECPDRHEINLSVDMAQNSAAEMIETPERVTILPLFIVHATNYFGRIVKKQKDQYTVLA
REMNDYFRVPGHRISVNTVEKSVFYGLREGAVCHRVQVVETPAKDEENVYKVTVEYIDEG
RTSQVNSDQLLHLPVKFQSLPPQAVEIIVCRVKPIDNEAEWNPKVTDHINHKIKGKLHHA
KVVHTLGRTVWVDPMVGVTSIPTMKMWINEYNIRSEILSTGLGTDNPEHVGEIQKLCTQI
PVLDHAESLEHLPAKPETTVEKLGASIQSLLLRSTKEDTADLEEVSSLQDPSIQENSAES
SNSPVTPPSNDVVQTKEAEDSTVHQQKGCHPPIKWFQDDVSVTLKVQILRATDSKCEFSR
EKVTFSAYSEGKLYVADLELYQSLIAEKSTCVIKDTEAVIFLVKEKKGTWCKLLKNKNVH
VSLDFERWEESEDERPFTVGSGKLSYPPAGSEEWVESSEDSDTESDE
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgtggtattaaaggttgaggatccaagttgcttttggattgctgtgaaagaa
tgtgtgcctggtgtagtcggtgaaactgtgtatgaaaacatgaatgctgaaatggaccag
ttttatagcagttctaaagatgcagaggaagtgaaacaagaggagataaaaaaaggccag
gtttacggggtgttcagcgaggagctgaagtgctggtgcagggctcaggtggagtcagtg
cggtgccaggcggatggttaccagctcggctgtttcctcgtggattatgccaagtactgc
tctgttccagcagagaacattcgagttttagcaggagcatttgcaaagatcccagacaga
gcaaagaagtgtcggctgcactgcacaaggccactgacactgcatattgactactgtgaa
aacactgccaaaataggaccagccaaaagatgggatactgctgctatccatcattttcga
aagcttcttgaagaggctaccgaggttaaagccacaatacagacagtagaagataaagtg
ttagaggtgtttctttttgtgactataagagatgaaaagatctgtgttaatgatgatctg
gttgcaaagcactttgctcgttacaaggaggatgaagggacagcagggagttcttcagat
gtttctgatgatgaagtgtccttcaatgctgagtgtgttccagtggagtttgttggtcct
acatttcttgccaggccaaaactgccctttggggaggaggtgtcaccacatcttgggcca
ggtcttgctggttgtaattctgttcttgaaaagccatcccgaaggtctcatacagatcta
aatgacaatactgtgcctgtggtcagcatggtgccaggtttgcctcccaaggaagataaa
gcagttcagacagagaggcttccacagttcttaaattctaatttccttcaggcacacaca
gttgaagatgaccaacagactttacagaatgttgggaaagaaaaaaactttgtgttcctg
agcaagaaaattgaaccatcatcacttttggaaacagcacctctttttgatggtctgaaa
aaggaacttgcttggaataagttttcaggccctaccttcacccagtcctactgttggcca
ccagtagctgggggatgtgatgtcgttgccatctcccatcagggaaatgatcccttatta
tatattccaccagttcttacccttttgcaggaaagtgactatgaagccttgcccagcatg
agtgggccactagcactgattttatgtcctggatggaagaaggcacaacttgtttttgac
ctgctgaaaacatacaggaaaggctgcagacaccttcatccaatgctgataatccttggg
cagaacaaggaagcagccagccagatggaaatccgaggtgaagtagtagtgactacacca
cacaacctcctgaggctgctggaacataacactgggctcttgtgtaggctttgccatctt
gttcttgatgaggtcgatgtgctgttctctgacacttgtgagcaggtgtttactatactg
gattgttacaagaaagccactgctcaggcacaggggaatctaccacatcagatcattgct
gtgggaactcagtggaataaacatatcacacccttgataaaggagttcatgcatgatcct
cacattgtgataactgttattgaagaagctgccatctttggaaatgtgcaacaggtcgtg
caaccctgcatgaacagcaacagaactgctgagttactcaaaatcctggacttcacccag
aggaatcatcagaaagtgctggtttttactgactcagcaactgaagtagagatgattcat
aaggcactgaagagcaactcaatagtttccttgaaaaagcataaagagagcaagtgtaat
gctaagtgtgtcttggaaaggtggagaaaaatgcacagttctggcactcctgctgtgtta
gttttagcagatgactgcctgcagtccttgggaatcacagatgcaacttgggtgatccat
ttcagtttcccatctccagcagtctttgggcagcgcctgcaaagcatgagtgacaacttc
aaccctgacataaaggattctgctgtagatgaggaagatctgaaggccaagtcagtcatt
ctgctgacagagagcagttcctgtcatgcacctgggattctctactatttagagcatgca
gaagttgaaattccagaagaactctatgatttgactgccagggtgcaggaatctgaggaa
gatgagacattttcaaggcctctgtgtgctgctcttaaaacatttgggctttgcaggaac
agaacagagtgtccagatcgtcatgaaattaatttatcagtagacatggcccagaatagt
gcagctgaaatgatagaaacacctgaacgtgtgacaatcctgcctctcttcattgtacat
gcaacaaactactttggtcgaatagtcaagaaacaaaaggaccaatacacagttcttgct
agagaaatgaatgattacttcagggtaccaggacacaggatttctgttaacactgtggag
aagtcagtgttctatgggttacgtgagggtgccgtttgccacagggttcaggtggtagag
actccagcaaaagatgaagaaaatgtctataaggtcacagttgaatacatagatgaaggc
aggacaagtcaagtgaatagtgatcagctgcttcacctacctgtgaagtttcagagcctg
ccacctcaggctgtggaaattatagtttgtagagtaaaacccattgataatgaagctgaa
tggaatccaaaggtgactgatcacattaatcacaaaattaaaggaaaacttcatcatgca
aaagtggtgcataccttgggaaggacagtttgggttgacccaatggttggggttaccagt
attcccacgatgaagatgtggatcaatgagtacaacattcgatctgagattttgtcgacg
ggtttgggaaccgacaatcctgaacatgtcggagaaattcagaagctgtgcacacagata
ccagttttggatcatgcagagagcttggagcatttacctgctaagcctgagactactgtt
gaaaaattgggagcttcaatacagtctttgttactaagaagcacaaaagaggacacagct
gatctagaggaagtgtccagtctacaggatccatcaatacaggaaaattctgctgaaagc
tctaacagtcctgtgactcctccaagcaatgatgtcgttcaaaccaaagaagcagaagac
tctactgtgcatcagcagaagggctgtcatccaccaatcaagtggtttcaagatgatgtg
agtgtgacactgaaggtacaaatactgagggcaactgacagtaaatgtgagttctctaga
gaaaaggtgactttcagtgcttattcagaaggcaaactttatgtggctgacctggagctc
tatcagtcactaattgcagagaaatccacatgtgtgattaaggatacagaggctgtgatt
tttctggtgaaagagaaaaaagggacatggtgcaaattactgaagaacaagaatgttcac
gtgtccttagattttgaacgctgggaggagtctgaagatgaaaggccttttacagttggt
tctggaaaactgagctaccctcctgcaggatctgaggagtgggttgagtcctcagaagac
agcgatacagaaagtgatgagtaa
DBGET
integrated database retrieval system
