Passer montanus (Eurasian tree sparrow): 120496359
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Entry
120496359 CDS
T07277
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03018
RNA degradation
pmoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120496359 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
120496359 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120496359 (LSM7)
03041 Spliceosome [BR:
pmoa03041
]
120496359 (LSM7)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120496359 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
120496359 (LSM7)
Spliceosome [BR:
pmoa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
120496359 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
120496359
NCBI-ProteinID:
XP_039552668
LinkDB
All DBs
Position
Unknown
AA seq
115 aa
AA seq
DB search
MASGGGGGGAGKMADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVL
DGTIEYMRDPDDQFKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtggcggcggcggtggcggtgcggggaagatggcggataaggagaagaagaag
aaggagagcatcttggacctctccaagtacatcgacaagaccatccgggtgaagttccag
ggcgggcgggaagcaagtggtgtcttgaaaggatttgaccctcttctgaaccttgtgctg
gatggtaccattgagtatatgcgagatccggatgatcaatttaaattaacagaagacaca
cgtcagctgggacttgtggtttgcagagggacttctgtggttctgatttgtccacaggat
ggaatggaagctattccaaaccctttcattcagcagcaagatggctaa
DBGET
integrated database retrieval system
