Passer montanus (Eurasian tree sparrow): 120496599
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Entry
120496599 CDS
T07277
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03013
Nucleocytoplasmic transport
pmoa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120496599 (CASC3)
03015 mRNA surveillance pathway
120496599 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120496599 (CASC3)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120496599 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
120496599
NCBI-ProteinID:
XP_039553141
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MMCGGELGTWLLPSPPLTPLTFLSLQESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESS
KVELKQDSNDSCESAARGEKGSEKVDPKGAVTGERQSGDGQESTEPVEKKVGKKVPKHLD
DDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPK
TRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSNERPPKPPRHQGAKSPS
APPRSFNSRSSASAGRMPPARNYPRMGGYKETRPGYRASEAAVLHRNGEQAKQEGGYRGK
HAEQSPSRDTSPELEVGHVHGSPGKEEGALENQATGADAVQPPPDRPVEKKSYSRARRTR
VKAGEAGKLAEEVPASEGLAPVIPKATPAENSPPPAKSNWESAVESSVDGLEQEMTQMNL
TEQNWSPGQSQFIPPRELRGIPNHMHVGTGPAPQFNRMEEMAVPGGRVKRYSSQRQRPPV
PEPAPPMHISIVEGHYYDPLQFQGPIYAHGENPAPLPPQGMIVQPEMHLPHPGLHPHQTP
PAMANPGLYPPPVSMPPGQPPPQQLLTPTYFSAPGVMNFGNPGYPYPPGALPPPPPPHLY
SNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEVVSRAPVNLSYLNL
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgggggggagctcgggacctggctgctgccctcccctcctctaacacccctc
acttttctctctttgcaggaaagtgaggatggcattgaaggagatgccgtgctgtctgac
tacgaaagcgccgaggactcggaggcagaggaagaggattacagcgaggaagaaagctcc
aaggtggagctgaagcaggacagcaacgattcctgcgagtccgcggccagaggggagaag
ggcagtgagaaggtggatcccaagggagcggtgacgggcgagcggcagagcggggacggg
caggagagcacggagcctgtggagaagaaagtggggaagaaggttcccaagcacctggat
gacgatgaggatcggaagaacccggcgtacatcccacgcaaggggctcttctttgagcat
gacctccgagggcagacgcaggaggaggaggtcaggccaaagggtcgtcagcggaagctg
tggaaggacgaggggcgctgggagcacgacaagttccgtgaggatgagcaggcccccaag
accaggcaggagctgattgccctgtatgggtacgacatccgctcagcccacaaccccgac
gacatcaaaccccggaggatgcgcaagccacggtttggcagtccccctcaacgagacccc
aactggtccaacgagaggccccccaagcccccgaggcaccagggtgccaagagcccctcg
gctcccccacggtccttcaacagccgcagctctgccagcgctggcaggatgccccctgcc
aggaactaccccaggatggggggctacaaggagacccgtccaggctaccgggcttcagag
gcagctgtcctgcaccggaacggggaacaagccaagcaggagggtggctaccgtgggaag
cacgcagagcagagcccatcaagggacacgtcccccgagttggaggtgggacatgtccac
ggcagccctgggaaggaggagggagctctggaaaaccaagccacaggtgctgatgctgtg
cagccgccaccggacagaccagtggagaagaaatcttattcccgggcaagaaggaccaga
gtcaaggctggggaggcagggaagctggcagaggaagtgcctgcttctgaggggctggct
cctgtgattccaaaagccacaccagccgagaattcccccccaccagccaagagcaactgg
gagtcagcagtggaatccagcgtggatggacttgagcaggagatgacccagatgaacctg
acagagcagaactggagcccggggcagtcccagttcatcccaccccgggagctgaggggt
attcccaaccatatgcacgtgggaactgggccagcgccgcagtttaaccggatggaggag
atggcagtgccggggggccgtgtgaagcgctactcgtcgcagaggcagagaccccccgtg
ccagagcctgcgccccccatgcacatcagcatcgtggaagggcactactacgacccacta
caattccagggaccaatctacgcccacggtgagaacccagccccgctgccgccccaaggg
atgattgtgcagccggagatgcacctccctcatccaggtttacacccccaccagacgccc
cctgccatggcaaaccccggcctgtaccccccaccagtgtccatgcccccgggccagccc
ccgccgcagcagctgctcactcccacttacttctcggcccctggagtgatgaattttggg
aatcctggctacccctacccccctggagctctgccccctccgccccctcctcatctctat
tccaacacgcaggcgcagtcccaggtctatgggggggtcacctactacaacactgtccag
cagcaggtgcagcccaagccctccccgccacgccggacgtcccagcctgtgaccatcaag
ccaccccctccagaggtggtaagcagggctccagttaatttgagttacttaaatctttaa
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