Passer montanus (Eurasian tree sparrow): 120496671
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Entry
120496671 CDS
T07277
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120496671 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoa03041
]
120496671 (DHX8)
Enzymes [BR:
pmoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120496671 (DHX8)
Spliceosome [BR:
pmoa03041
]
Complex C
Other components
Step II factors
120496671 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
PhoH
TsaE
Sigma54_activ_2
Cas3-like_C_2
ABC_tran
Transformer
Motif
Other DBs
NCBI-GeneID:
120496671
NCBI-ProteinID:
XP_039553265
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MAELAAAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKAILLK
NGAEFTDSLISNLLRLIQTMRPPPKPSTSKEAVVKPKSEKEKLRELYPALCRPDNPNIRN
MLDEDDVKVAADALKELEALMPSADKQGKQRGSDHRVKKRKRSRSRSRDRKRRHRSRSRS
RSRTWDRNRGKSRYRSRSRSWSPSKERRDREKYLEKSHERWRDKHIDRPPAEEPSIGDIY
NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTG
SKTSLSMKDVDQDTGEDLNPNRRRNLVGEPNEESSMRNPDRPSHLSLVSAPEVEDDSLER
KRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPF
LRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTH
WVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIF
RLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAK
RVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAH
ERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILY
TKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELI
ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK
TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAST
VLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPM
LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV
YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAIC
SGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTI
DPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggcggcggccgaggagctcgccaagctcgagtacctgtcgctggtgtcc
aaagtgtgcaccgagctcgacaaccacctgggcatcaacgacaaggacctggccgagttt
gtgataagtcttgccgagaaaaacaccacgtttgacacatttaaggcgattcttctgaag
aatggggctgagttcactgattccctcatcagtaacctgctgcgtctcatacagacaatg
cggcctccaccaaaaccatccacgagcaaagaggcagttgtcaaacccaaatcagagaaa
gaaaagctgagagaattgtatccagccctttgcaggccggacaatcccaacatcaggaat
atgctggatgaagatgatgtgaaggtggcagctgatgccctgaaggagctcgaggctctg
atgcccagtgcagacaagcagggcaagcagaggggcagcgaccatcgggtgaagaagagg
aagaggagccggagccggagcagggacaggaagcgaaggcacagatctcgctccaggtcc
cgttccaggacttgggacaggaacaggggaaaatccagataccggtcaaggagcagaagt
tggagtcccagtaaggagcgcagggatcgggagaaataccttgagaagagccatgagagg
tggagagacaagcacatagaccgaccaccagctgaggagccttccatcggggacatctac
aacggcaaagtcacgagcataatgcagtttgggtgctttgtgcagctggaaggactgagg
aaacgctgggaaggcttggtccacatctcagagctgcggagagaaggacgggttgccaat
gttgctgatgttgtgagcaaaggacaaagagtgaaagtcaaagtgttatcttttactgga
tccaaaaccagcctgagcatgaaggatgttgatcaagacactggggaagacctgaaccca
aaccgtaggaggaacctggttggagaacccaacgaggagagctccatgaggaacccagac
agacccagccacctgtccctggtgagcgcccccgaggtggaggacgacagcctggagcgg
aaacgcctcacgcgcatttcagacccggagaagtgggagatcaaacagatgattgcagct
aatgtgctttccaaggaagagtttcctgactttgatgaggagactgggattcttcctaaa
gttgatgatgaagaagatgaggatcttgagattgagctagttgaagaagagccaccattt
cttcgaggccacactaaacagagcatggatatgagtcccattaaaatagtaaagaatcca
gatggttccctgtcccaggctgccatgatgcaaagtgctttagctaaagagaggcgagaa
cttaaacaagcccagagggaagcagagatggattccatccccatgggcctcaacacacac
tgggtggatcctctccctgatgtggatggaagacaaatagctgcgaacatgagaggtatt
gggatgatgccaaatgatatcccagagtggaagaaacatgcatttggtggcaacaaagct
tcttatgggaagaagacccagctttccatcattgagcagagagagagtctcccaatcttc
agactgaaggagcagctgatacaggctgtgcatgacaaccagattctgattgttattgga
gagacaggatctgggaaaacaacccagattacccagtacctggctgaggcaggatatacc
tcaagagggaagattggatgtactcagcctcgcagagtggctgcaatgtctgttgccaag
agggtgtcagaggaatttggttgctgcttgggacaagaggttggctacaccattcggttt
gaagactgcaccagccctgagactgtcatcaaatacatgacagatgggatgttactgaga
gagtgcctgatagacccagatctcacccagtatgccatcatcatgctggatgaggcccat
gagaggaccatacacacagatgtgctctttgggctcctgaagaagacagtgcagaaacgg
caggacatgaagctgatagtgacatcagcaactctggatgctgtgaaattctctcagtat
ttctatgaggcaccaatcttcacaattcctggtagaacatacccagtagaaattctgtac
acaaaagagccagagacagattatttggatgccagtctgattacagtaatgcagatccat
ttaacagagccaccaggtgacattttggtctttctaactggccaggaagagattgacact
gcctgtgaaatcctctatgagaggatgaaatctctaggacctgatgttccagagctgatt
atcctaccagtatattcagctttgcccagtgaaatgcagaccaggatctttgacccagcc
ccaccagggagcagaaaggttgtcattgccaccaacattgcagagacatctttgaccatt
gatggaatatattatgtggttgatcctggctttgtgaagcagaaagtttataactccaag
actggaattgaccagctggtggtgacaccaatttcccaggctcaagccaagcagcgggca
ggcagggctggcagaacaggcccaggaaaatgctacaggttgtacacagaacgtgcatac
agagatgagatgctgaccaccaacgtgcctgaaatccagagaaccaatttggccagtaca
gtgctctccctgaaggctatgggcatcaatgatttgctgtcctttgacttcatggatgct
ccccccatggaaactctcattactgccatggagcagctctacaccctgggagctctggat
gatgaggggctgctcactcgacttggacgcaggatggcagaattccccctggagcctatg
ctgtgtaagatgttgatcatgtcagtgcatctgggatgcagcgaggagatgctgaccatt
gtctccatgctgtctgtgcagaatgtgttctacaggccaaaggataaacaagcacttgct
gatcaaaagaaagccaagttccatcaaacagaaggtgaccacctcacgctgctggccgtg
tacaattcctggaagaacaataagttttcaaatccctggtgctatgaaaatttcatccag
gcccggtccttacgccgggctcaggacattcgcaagcagatgttgggcatcatggacagg
cataagctggatgtggtgtcctgtgggaaggccacagttcgggtccagaaggccatttgc
agtggcttcttcagaaatgcagccaagaaggatccccaggaagggtacaggacactcatt
gaccagcaggttgtctacatccacccatccagtgctctcttcaacaggcagcctgaatgg
gtggtgtatcacgagctggtgctgaccaccaaggagtacatgcgggaggtgacaaccatc
gatcctcgctggctggtggagtttgccccagctttcttcaaggtctctgacccaaccaag
ctgagcaagcagaagaagcagcagaggctggagcccctctacaaccgctacgaggagccc
aacgcctggaggatctcccgcgccttccgccggcgctga
DBGET
integrated database retrieval system
