Passer montanus (Eurasian tree sparrow): 120496789
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Entry
120496789 CDS
T07277
Symbol
EXOSC10
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120496789 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120496789 (EXOSC10)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
120496789 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
120496789
NCBI-ProteinID:
XP_039553477
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MAAAGREGSPVGQAGSSGAPADTEGTSAMSALPGFDSPDAFVKYALGTVVAATKASNGLP
QPGDEYDFYCSFPGFRAYCSTQSDRLLRCMSQVMQYHGCRSLMKDSSKVTGLEDKFDMLV
DSNDVILERVSILLDEAAGVNRNQQPVLPAGLQPPQMIVSSWNRKAGEFHKRTQSETFRL
LHAKNISRPQLKFREKIDNSNTPFVPKIFIKPNALKPLPEALTKSGRQRKERPEDLDVPA
ALADFIHQQRTQKTEQDMFAHPYQYELEHFSPPDEVLKKPELQMYRPIEETPCHFITTLD
ELVELNEKLMTCKEFALDLEHHSYRSFLGFTCLMQISTRTEDFIIDTLELRSDMNILNET
FTDPAIVKVLHGADSDVEWLQRDFGLYLVNVFDTHQAARLLNLGRHSLDHLLKLYCNVDA
DKKYQLADWRIRPLPEEMIRYARDDTHYLLYIYDKVRELLWERGKEQPTQLQVVWQRSRD
ICLKKYIKPLFTDESYLDLYRRQKKHLDTQQLAAFRLLFAWRDKIARQEDESTGYVLPNH
MLLKIAEELPKESQGIMACCNPVPPLVRQQINELHLLIQQAREMPLLKSEITSAVRKRAP
LPSPEKLENALFGPHDSSRIPMDGFQNNSALDPALVLEDVCLFSDSDRTMDIQDSQPEST
CLVATTTVSIFSECDENEGNKRTLTTAQRKAQLIMESFENPFKMYLPPEENSAYVSQSAK
FDPSSKIYEISNRWKLMSQAPVQKKSKNETNKKAAQQSAAHVQTQQLHKKAAENVVSIRQ
QATQEQANRKKERATSEAGAETEAELPTQEKKRQKKTQQPEELEALRQFTPFDYSNSSFK
VFAGGSKSKQSPQFDPAKQAYTGKKFAGANKLQQSGNRSMSYLMGKAERGSTHHWPKR
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccggccgtgaggggagcccggtggggcaggcgggcagctccggcgcgccc
gccgacaccgagggaactagcgccatgtcggccttgcccgggttcgacagccccgatgcc
ttcgtcaagtacgctctgggcacagtggtggctgcaacaaaggcatccaacgggctcccc
cagcctggagacgagtacgatttctactgcagcttcccggggttccgtgcctactgcagc
acgcagagcgaccgcctgctccgctgcatgagccaggtgatgcagtaccatggctgccgg
agcctcatgaaagattccagcaaagtgacagggctggaagacaaatttgacatgctggtt
gactccaatgatgtcattcttgaaagagtgagtattttgttggatgaagcagcaggagtg
aatagaaaccagcagccagtcctgccagctgggttgcagcccccacagatgattgtttcc
agctggaaccgtaaggcaggagaattccacaaaagaactcagtctgaaacattccgactg
cttcatgccaagaatatttctcgaccacagcttaagtttcgtgaaaagattgacaattcc
aacactccctttgtacctaaaatttttatcaaaccaaatgctttgaagcctttgcctgaa
gccctcacaaaaagtggacggcagagaaaggagcgccctgaggacttggatgtgccagct
gctttggcagacttcatacatcagcagaggacgcagaaaactgagcaagacatgtttgct
cacccttaccagtatgaactggagcatttttctccaccagatgaagttctcaagaaacct
gaactccagatgtacaggcccattgaggaaacaccctgccattttatcaccacactggat
gagttggtagaactaaatgaaaagcttatgacttgcaaagaatttgccttggacttagag
caccactcctacaggagcttcctcggcttcacatgtctgatgcagatttccacccgaaca
gaagacttcattattgatacattggaactgcgcagtgacatgaacatcctcaatgagacc
ttcactgaccctgcaattgtgaaggtccttcatggtgctgattcagacgtggagtggctg
caaagagacttcggtctgtacttggtgaatgtgtttgatactcaccaagctgctcgtctc
ctcaatcttggcagacattctttggatcacttgctaaagctgtactgcaatgtagatgct
gacaagaagtaccagctggctgactggagaatacgccctttgccagaagaaatgatccgg
tatgcccgtgatgacactcactacttgctctacatctatgataaagtgagggagttgctg
tgggagagagggaaggagcagcccacacagctgcaggttgtgtggcagcgcagcagggac
atctgcctgaagaaatacatcaagcccctctttacagatgagtcctaccttgatctctac
aggaggcagaaaaaacaccttgatacccagcagctggcagcatttaggctgctgtttgca
tggagagacaaaatagcacgtcaagaggatgagagcacggggtatgtgctaccaaatcat
atgctgttgaagatcgcagaggagctgcccaaagaatcccagggtatcatggcttgctgt
aaccctgtcccaccacttgttcgccagcagattaatgagttgcatctgctcattcagcag
gcccgagagatgcctcttctcaagtcagagattacttcagcagtcaggaagagagcacct
ctacccagccctgagaagctggagaatgccctgtttggaccacatgacagttcacggatt
cctatggatggttttcagaataactctgccttggaccctgcactggttttggaagatgtt
tgcctcttttcagacagtgacaggacaatggatattcaagatagtcagccagagtcaacg
tgtcttgttgctactaccactgtcagcatattcagtgaatgtgatgaaaatgaaggaaat
aagaggactttaaccactgcacagcggaaagctcagctaataatggagtcctttgaaaat
ccatttaaaatgtatctacctccagaggagaattctgcctatgtctcacaatctgcaaag
tttgacccatcatcaaaaatttatgaaatcagcaatcgatggaagttgatgagtcaggca
ccagtgcagaagaagtccaagaatgaaaccaataagaaagcagcccagcagtcagctgcc
catgtccagacacaacagttgcataaaaaggcagcagaaaacgttgtatctattcgtcag
caagccacgcaggagcaagctaataggaagaaggagagagccacaagtgaagcaggagca
gaaacagaagcagagttgccaacacaggaaaagaaacggcagaagaaaacccagcaacca
gaggagctggaagcactaaggcagtttaccccctttgattacagcaattccagcttcaaa
gtgtttgcaggaggcagcaaatcaaaacagtcaccacaatttgatcctgccaagcaagct
tacacaggcaagaaatttgctggagctaacaaacttcaacagtctggaaaccggagcatg
tcctacctgatggggaaagctgaaaggggttcgacacaccactggccaaagagataa
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