Passer montanus (Eurasian tree sparrow): 120497077
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Entry
120497077 CDS
T07277
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoa03041
]
120497077 (PRPF39)
Spliceosome [BR:
pmoa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120497077 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_12
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
120497077
NCBI-ProteinID:
XP_039554059
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MENAESTEEEQPTVGNESAEPSAESAAEEQHMDFSTEIMSVTEMEQSPDSSPDLNEDNTQ
ESEIPNIESLQTTDLEADFPPDFDKFWKVVEDNPQDFTGWVYLLQYVEQENHLPAARKAF
DRFFSHYPYCYGYWKKYADLEKRHDNVKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLD
PADPETNSTIRGAYEHAVLAAGTDFRSDRLWEMYINWENDQGNLREVTSIYDRILGIPTQ
LYSHHFQRFKEHIQNNLPRDFLTTEQFVQLRRELAAASGHSGEDGDELPCGTEDITDPAK
LITEIENMRHRIIEIHQEIFNHNEHEVSKRWTFEEAIKRPYFHVKPLEKIQLKNWKEYLE
FEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLPKKP
MVHMLWAAFEEQQGNIDEARRILKTFEECILGLAMVRLRRVSLERRHGNMEEAEHLLEDA
VRNAKSISEASFYAIKLARHLFKVQKNLPKARKVLSEAIELDKENTKLYLNLLEMEYSGD
LKQNEENILSCFDKAIHGALSIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEHQALLKEQ
ETLKRRAENGSEEPDEKKLLTEEAGLASAQLMDGDMQVNQAAYNYNAWYQYNYQNAWNYG
QYYHTT
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcggagagcacggaggaggagcagccaactgtgggcaatgagagcgcggag
cccagcgccgagagcgcggccgaggagcagcacatggacttcagcaccgagatcatgagt
gtcaccgagatggagcagtccccagacagctccccggacctcaacgaggacaacacgcag
gagagcgaaattccaaacattgagagcttgcagaccacagatctcgaggctgacttccct
ccggattttgacaagttttggaaagtagtagaggacaatccgcaggatttcacaggatgg
gtttatctgctgcagtacgtagagcaggagaaccacttgccagcagccaggaaagccttt
gacaggtttttctcacactacccctactgctatgggtactggaagaagtacgcggacctg
gagaagcgccacgacaacgtcaagcagtcagacgaggtctatcgccgagggcttcaggca
attcctcttagtgttgatctttggatacattatattaacttcttaaaggagaccttggac
cctgctgatcctgaaactaacagtaccatcaggggagcctatgaacatgcagtgctggct
gctgggacagatttccgatctgacagactctgggaaatgtatataaactgggaaaatgac
cagggaaacctaagggaagttacatccatctatgaccgcatcctgggaatcccaacgcag
ctctacagccatcacttccagaggtttaaagagcacatccagaacaacctgccccgagac
ttcctgaccacggagcagtttgtgcagctgcgccgggagctggcggccgccagcggccac
agcggcgaggacggggacgagctgccctgcggcaccgaggacatcaccgaccccgccaag
ctaatcactgagatagagaacatgaggcacagaatcattgagatccatcaggagatattt
aaccacaacgagcacgaagtcagtaagaggtggacgtttgaggaagcgatcaagaggcct
tactttcatgtaaaacctctggagaaaattcagctgaaaaactggaaagagtacttagag
tttgagatagagaatggcactcacgagcgagtcgtggtcctctttgagagatgtgtcatt
tcatgtgccctctatgaggacttctggatcaagtatgccaaatacatggagaaccacagc
atcgagggcgtgaggcacgtgtacagcagggcctgcaccatccacctgcccaagaagccc
atggtgcacatgctgtgggcagccttcgaggagcagcagggcaacattgatgaagccaga
aggatcctgaagacgtttgaggagtgcatcctggggctggccatggttcgcctgcgcagg
gtgagcctggagcgccggcacggcaacatggaggaggcagagcacctgctggaagatgct
gtcaggaatgccaagtccatcagtgaggcctccttctatgccatcaaactcgccaggcac
ctcttcaaagtgcagaaaaacctgccaaaggcaagaaaagtgctgtcagaagccatagaa
ctggacaaagaaaacaccaaactgtacctgaacctgctggagatggagtacagtggtgac
ctcaagcagaacgaggagaacatcctgagctgctttgacaaggccatccatggggccttg
tccatcaaaatgaggatcaccttctcacagagaaaagtggaattcctggaagattttggg
tctgatgtgaacaagctcctggatgcctacgacgagcaccaggcgctgctgaaggagcag
gagacgctgaagcggcgtgcggagaacggctcggaggagccggacgagaagaagctgctg
acggaggaggcggggctggcgtcggcgcagctcatggacggggacatgcaggtcaaccag
gctgcctacaactacaacgcctggtaccagtacaactaccagaacgcctggaattacgga
cagtattaccacacaacctga
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