Passer montanus (Eurasian tree sparrow): 120497331
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Entry
120497331 CDS
T07277
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120497331 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoa03041
]
120497331 (PRPF40A)
Spliceosome [BR:
pmoa03041
]
Complex A
U1 snRNP components
U1 related factors
120497331 (PRPF40A)
Complex B
120497331 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
120497331
NCBI-ProteinID:
XP_039554610
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MRPGAVDRGSLMMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMP
GMMQSVMPGMMMSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVSTVQQSSTTPS
SASEEHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSD
SGKPYYYNSQTKESRWAKPKELEDLEAMIKAEENSTKPEDAAAASAPAAAGEAPSGASAA
PAAESAAATAAPTGAAAEGESAPAAAAGDTDTAGTAAAEEQGQGSAAPGTQDGSADSAAA
ATDEAKQEASGDAAAKKEDEDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAM
KMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTS
TTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILD
NMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKS
LLRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPAISSDIRFTSMLGQPGSTALD
LFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKL
AFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEPA
FEDITLESERKRIFKDFLHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDDS
HSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKER
ERDSEKERARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccggcgccgtcgaccgcggctcgctcatgatgggccacccgggaatgccccac
tacccccccatggggatgcaccccatggggcagagacctcccaacatgcccccggtgccc
cacgggatgatgccgcagatgatgccccccatgggagggccccccatggggcagatgcct
ggaatgatgcagtcggtgatgcctggaatgatgatgtcccacatgtcccaggctgccatg
cagcccacggttcctccaggagtgaacagcatggatgcacaagtaggtgtgacccctcct
gggactcagacaacgcatcccgtggtctccacagtgcagcagagctccaccacccccagc
tctgccagcgaggagcactccaagcagaaatccacgtggacggagcacaaatccccggat
ggaagaacttattactacaacaccgagaccaagcagtccacgtgggagaagccagatgac
ctcaaaacccctgctgagcaattgttgtccaagtgtccctggaaggagtataaatcagat
tctgggaagccttattattacaattcccaaacaaaggaatcccgctgggcaaaacccaaa
gagctggaggaccttgaagcaatgattaaagctgaagaaaacagcacgaagccggaggat
gcggccgccgcctcggctccggccgcggccggggaggctccgagcggggccagcgcggcc
ccggccgccgagagcgccgcggccacggctgctcccacgggagctgctgccgagggggag
tctgccccggccgctgccgcgggggacacggacactgccggcacagccgcggccgaggag
cagggccagggcagcgccgcccccggcacgcaggacggcagcgcggacagcgcggcggcc
gccaccgacgaggccaagcaggaggcctcgggagatgctgctgcaaagaaggaggatgag
gatgcccaaccagttaaaaaaacctacacatggaacacaaaggaagaggccaaacaagca
tttaaagaactgttaaaagaaaagcgggttccatccaatgcttcctgggagcaggccatg
aaaatgatcattaatgaccccagatacagtgctttggcaaagctgagtgaaaagaagcag
gcctttaatgcctacaaagttcagacagagaaggaggagaaggaagaagccagatccaag
tacaaggaagccaaggaatccttccagcgcttcctggaaaaccatgagaagatgacatcc
accaccagatacaagaaagctgaacagatgtttggggagatggaagtgtggaatgccata
tccgagcgggaccggctggagatttatgaggatgttctgtttttcctgtccaagaaggag
aaggaacaagccaagcagctgcggaagaggaactgggaagctctgaagaacatcctggat
aacatggccaacgtcacctactgcaccacctggtcagaggcccagcagtacctcatggac
aaccccacctttgctgaggatgaggagctccagaacatggacaaggaggatgccctgatc
tgttttgaggaacatatcagggccttggagaaagaggaggaggaagagaagcagaaaagt
ttgctgagggaaaggaggaggcagcgtaaaaacagggaatctttccagctgtttctggat
gagctgcacgagcacgggcagttgcactccatgtcctcctggatggaattgtacccagcc
atcagctccgacatcagattcaccagcatgctcggccagcctggatcaacggcacttgac
ctgttcaagttttatgtggaggatttgaaagctcgttaccacgatgagaagaagataatt
aaagacatcttaaaggataaaggatttgtggtggaggtgaacacttcctttgaggatttt
gtcactgtcatcagctccaccaaaagagccaccacgttggatgcagggaatatcaagctg
gctttcaacagtctgctggagaaggcggaagcgcgggagcgcgagcgggagaaggaggag
gcgcggaagatgaagaggaaggaatcagccttcaagagcatgctgaaacaagccaccccc
cccatcgagctggacgctgtctgggaggatatcagagacagatttgtgaaggaaccagca
tttgaagacatcaccctggaatctgaaaggaaaaggatatttaaggatttccttcatgta
cttgagcacgagtgtcaacaccaccactccaagaccaagaaacattcgaagaaatccaaa
aaacaccaccgcaagcgctcgcgctcccgctccggctcagagtccgaggatgacgacagc
cactccaagaagaagcggcagcgctcggaatcgcggtcggtgtcggagcgttcttccagc
gccgagtccgagaggagttacaagaagtccaaaaaacacaagaagaagagcaagaagagg
aggcacaagtctgattcaccagaatctgatgcggaacgagagaaggacaagaaagaaaga
gagagggacagtgagaaggaaagagccagacagagatccgagtccaagcataaatctccc
actaaaaaacggcctggaaaagattccggaaactgggatacctctggcagcgagctcagc
gagggcgagctggaaaaacagaggaggactcttttggagcagctggatgaagatcaatga
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