Passer montanus (Eurasian tree sparrow): 120497368
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Entry
120497368 CDS
T07277
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmoa04990
]
120497368 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
pmoa04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
120497368 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
120497368
NCBI-ProteinID:
XP_039554689
LinkDB
All DBs
Position
Unknown
AA seq
1741 aa
AA seq
DB search
MASPGLELGEVQPPAEPPQPELAFTEAQKWIEQVTGRSFGEKDFRSGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPGDLQDTSNRATIKNIDYS
RKLKNVLVTIYWLGKAANSCTSYSGSTLNLKEFEGFLAQMRKETEDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDGRGSDSETDLPHR
KMPDVKKDDMLARRTSHGEPKSAVPFNQYLPNKSNQTFYVPAPLRKKKAEREEYRKSWST
ATSPLGDRPFSKSHPETIEEELNETPGLCEKEKVGSMAPEASSLKSQLGVNQSEENSTDQ
SPSYSAKETSAPKGKDVEEIRKLRRLEQAGIKVMSAAQRYGSKKPICEDSGSTPDIILRK
DNPFMTHYQGKDSGSEDEAASRIPDLEKDDFATRRARMNQPKHTVPFNSFLVGPYTSKDK
GKPEDVKKPLQMEKKEHARRRRVHMTSVRQTVTSKESPLLQNEKTESEEEQQVKELDNER
DDLAKRKSQSILPQLQEDVLFVNASITKADLETWKRLKLSGEPSEEDFRCSNNTLPPSDT
TVKVVAHDDFAVRKTRANRKAGSPKQKFVHFGPVTEIDQQKWDKLVIGRASSKSGTEEES
KQDGVESFSGVESSPSTTAVSLGFAECSSEVSEPENESSEGGVKSGTDDSCRRIPSPVPA
SDVISEEQTPRSLSKRQESAKEECDRNLPDIERDDMLVRRMGTFPRRTTSSIPVNCPPLS
VAPYLLPQQQEEAVAREKDLKTLQEGESTVTQEESQEQLEIPQLQSGETENKMKFPDPQR
DDMLARRTGAFLKQPGPNVKQFLPMPFSKQQNKQGTATELEKKATRPQKCPQVYTNSSGK
PAIEPLQEQQQGQEHSLPPTGQDEIISTAQVAEDGNNEVHLVQTSKLQEVPEENKMEALS
SKDEHLQTFGPRSAVSDDAESMSMFDMRCEEDAVSQPHSKARHEKLQNIHNQLKEDETRW
QDDLARWKSRRRSASQDLIKKEAERKKMERLLAGDGTNERRKSIKTYREIVEEKERRERE
LHEAYKNAKTQEEAESILQQYTERFTISEAVLERLQMPKILERSHSVEPNSPLKDPNPLR
YLRQQSLPAPKFTATIEATIVPTTELEPSSSTGRTSPSKSISKAVPMLTPKPYSQPKNTQ
EVLKNFKVDGKVSMNGENVNGTEEKDKECTTVIFTPSPTRSVKFDGVARGDKSPVELKKD
PPSVELSLQSPATQSVHKEPTASPVELNAADSLQAEPSPSSVTPAPPECPSPDQKQFKST
AACSSPVVKRLEFLPSPVPSEENASSKKDVKKAETEQQKEAELPSTQEVIKAKALEEKGS
VVLPFLKKLPETSQVTLHNSGPQADSDTGDKSNRFNFWSWDPEEERKRQERWQHEQERLL
QEKYQKEQYKLKEEWEKAQREVEEEERRYYEEERKIIEDTVVPFIVSSNSAELLSSSSST
TEGNKTVNSTDSNSCPGEGKQKEVTKQKKLLWEQDSMLSLKSKESELWQEKRSGNKVLSG
YPGAGVLKGGSEQEHHMPVMERSSPARLNLPLAQDDNVSWNQQLLTKRSPQCTEDTRQRP
FLGQTVGQQPSSAGEARRAGYHENFRSGPSSPCSPALSQSPNRSVSGKKLCSTCGLPLGK
GAAMIIETLGLYFHIQCFRCGVCKGQLGDAASGTDVRIRNGLLNCNDCYIRSRTAGQPTT
L
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcctgggctggagctgggagaggttcagcctcctgccgagcccccccagcct
gagttggccttcaccgaggcgcagaaatggatcgagcaagtgacgggcagaagttttggt
gagaaagattttcgttctgggttagaaaacggcattcttctgtgtgagttgctgaatgcg
ataaagccaggattggtaaaaaagatcaatagactaccaacccccattgcaggtttggat
aatatcatattattcttaagaggctgcaaagaactgggacttaaagaatctcagcttttt
gatcctggtgatctgcaggacacatcaaacagagcaaccatcaagaacattgactatagt
aggaagctgaaaaatgtattagtcaccatttattggctagggaaagcagcaaacagctgc
acatcatatagtggatcaaccctgaacctgaaggagtttgaaggcttcctggcacaaatg
agaaaggaaacggaggatattgagagccccaagcgcagcattcgtgacagcggctatata
gactgctgggactctgaacgcagtgactccctctccccgcctcgccacggcagagatgat
tcctttgacagtctggactcctttggctcccgctcgcagcagacaccgtctccagatgta
gtgctcagagggagtagtgatgggagaggaagtgactcggaaactgacctgccacacaga
aagatgccagatgtgaaaaaagatgatatgttggcaaggcggacctcacatggtgaacct
aaatcagctgtgccttttaaccagtacctcccaaacaagagcaatcagactttctatgta
cctgctcctcttcggaagaagaaggctgagcgagaggagtaccggaagagctggagcaca
gcgacgtcgccgctgggagacagacctttcagcaaatcccaccctgaaaccatagaagaa
gaactgaatgaaacaccgggactgtgtgaaaaggagaaagtgggctccatggctcctgaa
gcaagctcccttaaaagtcaattaggtgtgaatcaaagtgaagaaaactccacagaccag
tctccttcatatagtgcaaaagaaacatcagcacccaaggggaaagatgtggaagagatc
agaaagttaagaagacttgaacaagctggtattaaggtcatgtcagcagcccagcgctat
ggcagtaaaaagccaatatgtgaagacagtggaagcaccccagacatcatccttcgcaag
gacaaccccttcatgacacattaccaaggaaaggattctggttcagaagatgaagcagcc
agcagaattcctgatttagaaaaggatgactttgctacccggagagccagaatgaatcaa
cccaagcacacagttccatttaactcctttttagttggaccctatacaagtaaagacaaa
ggtaaaccagaagatgttaaaaagccattgcagatggaaaaaaaggaacatgcaagaaga
agacgggtgcacatgacatcagtaaggcaaacagttacaagcaaagagagcccacttctg
caaaatgagaagactgagtcagaggaggaacagcaggtgaaggagcttgataatgagaga
gatgatttggcaaaacggaaatctcaaagcatccttcctcagctacaagaagatgtgctt
tttgtcaatgcctctataacaaaagcagatctggagacctggaaaagattgaaactgtca
ggggagcccagtgaagaagatttcagatgttccaacaacactctgcctccaagtgatacc
acggtgaaagtggtagcccatgatgattttgctgtccgcaaaaccagagcaaacagaaag
gctggtagccccaagcagaagtttgtgcattttgggccagtaactgagattgatcaacag
aagtgggacaagctcgttattggcagagcttcatccaagagtggaacagaagaggaaagc
aagcaagatggtgtggaaagtttctctggtgttgaaagctctccttcaaccactgctgtc
agtcttgggtttgctgaatgcagcagtgaagtatctgagcctgaaaatgagtccagtgag
ggaggagtcaagtcaggtacagatgactcttgcaggagaattccatcacctgtaccagct
tctgatgtcatctctgaggaacaaaccccacggagtttgagcaaacggcaagaaagtgcc
aaggaagaatgtgacaggaatttaccagatatagagagagatgatatgttggttagaaga
atgggaacttttccaaggcgaaccacaagctccattcccgtaaattgtcctcccttgtca
gtagctccttatctgctgccgcagcagcaagaggaggctgtagctcgtgaaaaggatttg
aagactctgcaggaaggagaaagtactgtcacacaagaagagagccaagaacagcttgaa
atccctcagctgcagagtggtgaaacagaaaacaaaatgaaatttccagaccctcaaaga
gatgacatgttagccagaagaactggagcttttcttaaacagcctgggcccaatgttaag
cagttccttcccatgcccttttcaaagcagcagaataagcagggcacagccacagaactt
gagaagaaagccacgaggcctcaaaaatgtccacaagtctacactaatagctctggaaaa
cctgcaatagaaccactgcaagaacagcagcaagggcaggagcacagtctcccaccaaca
ggacaagatgagattattagtactgcccaagtggctgaagatggcaacaatgaagtccac
cttgttcaaacatctaagcttcaggaggttcctgaggaaaacaaaatggaagcactttca
tccaaggatgagcatctgcaaacattcggccccagatctgctgtgtctgatgacgcagag
agcatgagtatgtttgacatgagatgtgaagaagatgctgtgtctcagcctcacagcaaa
gctcgccatgagaagctgcagaatatacacaaccagctgaaagaggacgagaccaggtgg
caagatgacctggctcggtggaagagtcgtcgaaggagtgcttcacaggatttgattaaa
aaggaagctgagagaaagaagatggagaggttattggctggagatggaacgaatgagcgc
aggaaaagcatcaaaacctaccgagaaatcgtggaggagaaagagagaagggagcgggag
cttcatgaggcatacaagaatgcaaagacacaggaggaggctgagagcattctccagcag
tacactgaaagattcactatcagtgaagctgtccttgagcgtttgcagatgccaaaaatt
ctagaaagaagccattcagtggaaccaaattccccactgaaagacccaaatcctctgaga
tatttaaggcaacaatcacttcctgctccaaaattcactgccacaattgaagcaaccatt
gttcccaccactgaactagagcccagcagttcaacaggacgcacatctcccagcaaaagt
atctccaaggctgtgcctatgctgacacccaagccttattcacaacccaaaaatacacag
gaagttttaaagaactttaaggtagatggaaaagtcagcatgaatggagaaaatgtcaac
ggcacggaagaaaaagataaagaatgtacaacagtaatatttactccttcaccaaccaga
tctgtgaaatttgatggagtagcccgaggggacaagtccccggtagagttgaagaaggac
cccccaagtgttgagctcagtttacagagtcctgccactcagagtgtgcacaaagagcca
acagcctccccagtggaactgaatgcagctgacagcctgcaagccgagcccagtcccagc
agtgtgacacctgcccccccagagtgcccatccccagatcaaaagcaattcaagtcaact
gcagcttgttccagccctgttgtgaagagattagaatttcttcccagtcctgtcccttca
gaggaaaatgcttcaagcaagaaagatgtgaagaaagctgaaacagagcagcagaaggaa
gcagagctcccttctacacaagaggtgattaaagcaaaagccctggaagaaaaggggagt
gtagtgctgccatttttaaagaaactaccagaaaccagccaagttactctgcataactct
ggtccacaagctgattctgatactggtgataaatcaaatcggttcaatttttggtcctgg
gatccagaagaagagcgaaagcgccaggaaaggtggcagcatgagcaagaacgcttactt
caggagaagtatcagaaggagcagtacaagctgaaagaggaatgggaaaaggcccagaga
gaagttgaagaggaggagcgtagatactatgaggaggaacgaaagataattgaggatact
gtagttccattcattgtttcttcaaactctgctgagctcctctcctcttcttcctctacc
actgaaggaaacaagacagtgaactcaactgattcaaacagctgtccaggggaaggcaag
caaaaagaagttacaaagcagaaaaagctgctctgggagcaggacagtatgttatctctg
aaaagcaaggaaagtgaactctggcaagaaaagaggagtggaaataaagtgctctcagga
tacccaggggctggtgtcctgaaaggaggaagtgagcaggagcaccacatgccggtgatg
gagcgcagctcacctgccagactgaacctgccactggctcaggatgacaatgtctcctgg
aatcagcagttgctgacgaagcgatctccacagtgcacagaggacactcggcagagaccg
ttcctgggccagactgtgggacagcaaccaagctctgcaggggaagcaaggagggcagga
tatcatgagaatttccgatctgggccatcatctccctgctctcctgctctcagtcagtca
cccaacaggtctgtcagcgggaagaagctttgttctacctgtggtctccctcttggaaaa
ggagctgccatgattattgaaacacttggtctttatttccatattcagtgcttcaggtgt
ggcgtttgcaagggccagctgggagatgcagcgagcggcacggatgtcaggattagaaat
ggtcttcttaactgcaacgattgttatatccgatcccgaactgctggacagccaactaca
ttgtga
DBGET
integrated database retrieval system
