Passer montanus (Eurasian tree sparrow): 120497432
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Entry
120497432 CDS
T07277
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03030
DNA replication
pmoa03410
Base excision repair
pmoa03420
Nucleotide excision repair
pmoa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120497432 (RFC1)
03410 Base excision repair
120497432 (RFC1)
03420 Nucleotide excision repair
120497432 (RFC1)
03430 Mismatch repair
120497432 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmoa03032
]
120497432 (RFC1)
03400 DNA repair and recombination proteins [BR:
pmoa03400
]
120497432 (RFC1)
DNA replication proteins [BR:
pmoa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120497432 (RFC1)
DNA repair and recombination proteins [BR:
pmoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120497432 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_14
AAA_30
Rad17
BRCT_2
AAA_5
RNA_helicase
AAA_16
RuvB_N
AAA_17
AAA_33
AAA_7
AAA_18
nSTAND3
TIP49
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
120497432
NCBI-ProteinID:
XP_039554879
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MAANPGGSDTSQDIRKFFGVVPPGKRQQCETVKKSEKIKNGEGPSSGKKREKDTKVNNSP
SEDDSKQKRTKKKRRIIYDSDSEEEVQSVKKSKKPPEKKTAASKPGKVLKRDPVVYISET
DEDDDFANKRISLKPKENGASVIGCPGTNTGKKEEVKPQAKSKPLSPVKQTPTSALDFFG
TRSVQRSEKKLVASKRKEPSQSRDSTLDDEAIARQLQLEEDSELERQLHEDEEFARTLAM
LDETPQKKKARKNTEEEQTVLSISSSPNATAGYKQTERVKATDSAGAARNYSAKPQTKSE
QLKGSGLSPQSSDGKKEEIAEKERGAQNSLSRGKAASGKEEKTTPKKEKVSPKKTESISP
EDSEKKRNNYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGVLECIERDEAKSL
IERYGGKVTGNVSKKTNYLVMGRDCGQSKCEKASALGTKIIDEDGLFDLIRTMPGKKSKY
ELAAETEAKKVESKPKKTPQKAETGKRNFSPYKREANNKKCNSTPEKGETIRSVKKETTA
VRKLTDFKRQTVEEKEAPKPKGNLVSEVNEDGTERLLWVDKYKPVSLKAIIGQQGEQSCA
NKLLRWLRNWHKNTLEGGQAKPSKTGSKDDGTGFKAALLSGPPGVGKTTTAALVCKELGY
SYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGASSSVSGKHVLIMDEVDGMAGNEDR
GGIQELIALIRHTKVPIICMCNDRNHPKMRSLVHYCLDLRFQRPRLEQIKGAMMSIAFKE
GLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTDASRAKKDIKLGPFDV
VRKVFAAGEEAARMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAAAGGNLKKHLVLLSRA
ADSICDGDIVDRQIRSKQSWNLLPTQAIYASVLPGELMRGYMSQFPVFPSWLGKFSSTGK
HDRIIQELAMHMSLRTQSCKRTVNMEYLSYLRDALVQPLKDFGTDGVQQAITFMDSYCLM
KEDVENIMEISTWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLSAVKASKRQSGSAA
TLDLSEDLTVEEIQSDEDEQDSVDSDAMIKQKKVKSSKLPKREKNEETTKKEGKRKEKTR
HLE
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaccctggagggagtgataccagccaggatatccggaaattctttggtgtt
gtacctcctggaaagcgacagcagtgtgagactgtgaaaaagagtgaaaaaattaaaaat
ggtgaaggaccctcaagtgggaagaaaagggaaaaggacactaaggtgaataattcaccc
agtgaagatgattccaaacagaagcggacaaaaaagaagagaagaataatctatgattca
gattcagaagaggaggtgcagtcagtgaaaaaatccaagaagccacctgagaaaaaaaca
gctgcttcaaaacctggtaaagttctaaagcgggatcctgttgtttatatttcagagaca
gatgaggatgatgattttgccaataaaagaatttccctgaaaccgaaggagaacggggcg
tcagtgattggttgtccaggaacaaatactgggaagaaagaagaggtaaaaccacaagct
aaaagcaaacccctctctccagtgaaacagactcccacctctgcacttgatttctttggg
acaaggagtgtccagcgctcagaaaagaagctggtagcaagtaaaaggaaagagccttca
cagagcagagacagcacactagatgatgaggccattgctaggcaactgcagcttgaagaa
gattcagagctggagagacaactgcatgaagatgaagaatttgctagaactctggccatg
ttggatgaaacaccacagaagaagaaggctcggaaaaacacagaagaagagcaaacagta
ctgagcatcagcagcagccctaatgcaacagctgggtataagcagacagaaagagtgaaa
gcaacagactcagctggtgcagccaggaattactctgcgaagccacagactaaatctgaa
cagttgaaaggttctggtttatccccacaatcatctgatggtaaaaaagaagagattgct
gaaaaagaaagaggtgctcaaaattcactatcaagaggaaaagcagcttcagggaaagaa
gagaagacaacaccaaagaaggagaaagtttctcccaagaagactgagtctataagtcct
gaggactctgaaaagaagcgaaacaattaccaagcttaccgaagcttccttaatcgcgag
ggtcccaaagcactgggctccaaagagatacctcaaggagctgagaactgcttggaaggc
ctgacatttgtaattacgggcgttctggagtgtattgagagagatgaggccaagtctctg
attgagcgatacggagggaaggtaactggcaacgtcagcaagaagacaaattacctggtg
atggggcgggactgcggccagtccaaatgtgagaaggcatcagctttaggtacaaaaatt
attgatgaggatggtctgtttgatcttattcgaactatgccaggcaaaaagtcaaaatat
gagctggcagctgaaacagaggcaaagaaagtggagtcaaaacccaaaaagacaccacag
aaagctgaaactgggaaaaggaattttagcccctacaaaagggaagctaataataaaaaa
tgcaactctactcctgaaaaaggagaaaccatcagatctgtcaagaaagaaaccactgct
gttcgaaaacttacggacttcaaacgtcagactgtagaggagaaagaagccccaaaacct
aaggggaacttggtttctgaggttaatgaagatggcacagagagactgctgtgggtagat
aaatataagcctgtatctcttaaagcaattattggacagcagggcgagcaaagctgtgcc
aataaactgctccgatggctcagaaactggcacaagaacaccttggaaggtggacaagca
aaacccagtaaaactggaagcaaagatgatgggacaggctttaaagcagcattactttct
ggtccgcctggagttggtaaaactactacagctgctttggtttgtaaggagctggggtat
agctacgtggagctgaacgccagcgacactcgcagcaagaacagcctgaaggaagtagtt
gctgagtcacttaacaacaccagcatcaaagacttctgttctggtgcatcttcatcagtt
agcgggaaacatgtgttgatcatggatgaagtggatggtatggcaggcaatgaagacaga
ggagggattcaggagctgattgctttgatccgacacacgaaggtgcccatcatctgtatg
tgcaacgaccgcaaccaccccaaaatgcgctccttggtccactactgtttggatcttcgt
tttcagaggcctcgtctagaacagatcaaaggtgccatgatgtctattgcatttaaagaa
ggtttaaaaattcccccacctgctatgcaagagataatcctggcagcaaatcaggacatc
agacaggttttacataatcttaatatgtggtgtgcaaaagacaaatcactgacttatgat
gaggctaaaacagatgccagcagagccaaaaaggacatcaaactgggccctttcgatgtt
gtccggaaggttttcgctgctggagaggaggctgcccgtatgtctcttatagacaaatca
gatcttttcttccatgattattcactagcacctctctttgtccaagagaactatgtgcat
gtgaaaccagctgctgctggaggtaatttaaaaaagcacttggtgctcttgagtagagca
gctgatagtatatgtgatggtgatatagtggacagacagattcgtagcaagcagagctgg
aatcttcttccaacacaggctatttatgcaagtgtcctcccaggggagctgatgaggggt
tacatgtcccagtttcctgtctttcccagctggctggggaaattttcatccacaggcaaa
cacgatcgtatcattcaagaactggcaatgcacatgagtctcagaactcagtcatgcaag
aggacagtaaatatggaatatttgtcgtatttgcgggatgcacttgtccagcccttgaaa
gactttggaacagatggtgtacaacaagctataacatttatggactcttactgcttgatg
aaagaagatgttgaaaatatcatggaaataagcacgtggggaggcaaacccagtcctttt
tcaaagttggatcccaaggtcaaagcagcttttacacgtgcctacaacaaagaggcacat
ctgactccatattcacttagtgctgtcaaggcatctaaaaggcagtcgggatctgcagcg
accttagatctgagtgaagacttgactgtggaagagatccagtctgatgaggatgagcag
gattctgttgacagtgatgcaatgattaagcaaaaaaaggtaaagtcttccaagctgcca
aaaagagagaaaaatgaagaaacaacaaaaaaagaagggaaaagaaaagagaaaaccaga
catttagagtaa
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integrated database retrieval system
