Passer montanus (Eurasian tree sparrow): 120497479
Help
Entry
120497479 CDS
T07277
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmoa00536
]
120497479 (SLIT2)
Glycosaminoglycan binding proteins [BR:
pmoa00536
]
Heparan sulfate / Heparin
Axon guidance molecules
120497479 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
LRR_1
hEGF
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_3
Motif
Other DBs
NCBI-GeneID:
120497479
NCBI-ProteinID:
XP_039554958
LinkDB
All DBs
Position
Unknown
AA seq
1547 aa
AA seq
DB search
MMCGWGKLTLSLGLLLAMAGAVAPQPCPAQCSCSGSTVDCHGLALRGVPRNIPRNTERLD
LNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSEL
LFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLT
LNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSH
LRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPTACTCSNNIVDCRGKGLTEIPTN
LPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYG
NKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS
PLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR
CSAKEQYFIPGVHHFGCTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHI
PQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTS
NRLESVQHKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFD
TLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFT
CDDGNDDNSCSPLARCPAECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPK
ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLS
LHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGE
MADKLLLTTPSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKG
QDCDIPIHACISNPCQHGGTCHLKEGEKDGFWCTCADGFEGENCEVNVDDCEDNDCENNS
TCVDGINNYTCLCPPEYTAANLNEVEKGELCEEKLDFCAQNLNPCQHDSKCIVTPKGYKC
DCTPGYVGEHCDIDFDDCQDNKCKNGAQCTDAVNGYTCVCPEGYSGLFCEFSPPMVLPRT
SPCDNYECQNGAQCIIKESEPICQCLSGYQGEKCEKLISINFVNKESYLQIPSAKIRPQT
NITLQIATDEDSGILLYKGDKDHIAVELYRGRVRVSYDTGSYPASAIYSVETINDGNFHI
VELLAMDQILSLSIDGGNPKIITNLSKQSTLNFDSPLYVGGMPVKNNIAALRQSPGQNGT
SFHGCIRNLYINSELQDFRNVPLQVGILPGCEPCHKKVCVHGTCHATSQSGFSCECEGGW
TGPLCDQQTNDPCLGNKCVHGTCLPINAFSYSCKCLQGHGGVLCDEEEMLLNPCQSIRCK
HGKCRLSGLGKPYCECGSGYTGDSCDKEISCRGERVRDYYQKQQGYAACQTTKKVSRLEC
KGGCSAGQCCGPLRSKRRKYSFECTDGSSFVDEVEKVVKCGCTNCPS
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcggctgggggaagctcaccctgtccctggggctgctgctggcgatggcgggc
gcggtggcgccgcagccgtgcccggcgcagtgctcctgctcggggagcaccgtggactgt
cacgggctggcgctgcgcggcgtcccgaggaacatcccccgtaacaccgagaggctggat
cttaatgggaataacatcacgagaatcacgaagactgactttgctggtctaaggcacctt
cgagttcttcagctcatggagaacaagattagtactattgaaagaggagcattccaggat
ttaaaagaactggagaggctgcgtctaaacagaaataacctccagttgctttctgagctg
ctcttcctggggactccgaagttatacaggcttgatcttagtgaaaatcagattcaagca
ataccaaggaaggcattccgaggagcagtagacataaaaaatctgcaactggattacaac
cagatcagctgtattgaagatggggcgttcagggctctgcgtgacctggaagtgctcact
ctcaacaataacaacatcactcgactatccgtggcaagtttcaaccatatgcccaaactc
agaacattccgccttcactccaacaacctgtactgcgactgccacctggcctggctgtcc
gactggctgcggcagcggccgcgcgtggggctctacacgcagtgcatgggcccgtcgcac
ctccgcgggcacaacgtggccgaggtccaaaagcgcgagtttgtctgcagcgatgaggaa
gaaggtcaccagtcctttatggctccatcctgcagtgtcttgcactgccctactgcatgc
acctgtagcaacaacattgttgactgtcgtgggaaaggccttactgaaatcccaacaaac
cttccagaaaccatcactgaaatacggttagaacaaaattcaatcaaggtcatacctcct
ggagctttctccccctacaaaaagcttcgaagaattgacctgagcaataaccagatctct
gaagcagctccagatgctttccagggcttacgttcactcaattcactagtgctctatggc
aataaaatcacagaacttccaaagggcctatttgaaggactcttttctctgcaactgcta
ttattgaatgccaacaagatcaattgtctgcgagttgatgcatttcaagacctgcacaac
ttgaatcttctttctttgtatgacaacaaacttcagaccattgcaaaaggcaccttctca
cccctacgtgcaattcagaccttgcatttggctcagaacccatttatctgtgactgccat
ctgaagtggctggcggattaccttcacacaaaccccattgagaccagtggtgcccggtgc
accagcccccgccggctggcaaacaaaaggattggccagatcaaaagcaagaaattccgc
tgctcagctaaagaacagtatttcattccaggagttcaccattttggctgcactgaagat
tacagatccaaattaagtggagactgctttgcagatttggcttgccctgagaaatgtcgc
tgtgaaggaaccacagtggactgctccaatcagaaactcaacaaaattcctgatcacatt
ccccagtacacagcagagttgagactaaataacaacgaattttcagtcctggaagctact
ggaatattcaagaaacttcctcagctgcgtaaaataaacctgagcaataacaagattaca
gatatagaagaaggagcatttgatggagcctctggtgtgaatgaactattgctcacaagt
aatcgcttggaaagtgttcaacacaaaatgttcaaaggactagaaagtctcaaaacactg
atgctgaggagcaacagggtgagctgtgtgggaaatgacagcttcacagggctgagctct
gtccgcctgctctcactgtatgacaaccagatcaccaccgtggcacccggctccttcgac
acgctgcattcgctctctacgctaaacctcttggccaatcccttcaactgcaactgccac
cttgcatggcttggagactggctaaggaagaaacgcattgtgacggggaaccctcgctgc
caaaaaccctacttcctcaaagagattccaatccaggatgtggcaattcaggattttaca
tgtgatgatggaaatgatgacaatagctgttctcccctggcccgctgccctgcagaatgt
acttgtctggacacagtagttcgctgcagcaacaaaggtctaaaagctttgcctaaaggc
atcccaaaagatgtgactgaactttatttggatggaaatcagtttacccttgttccaaaa
gagctttccaactacaagcatttgacactcatagatttaagtaacaacagaatcagcact
ctttctaatcagagcttcagcaacatgactcagctgctcaccttaattcttagttacaac
cgcctaagatgtattcctgcacggacttttgatgggttgaaatcacttaggttgttgtct
ttacatggcaatgatatttctgttgttcctgaaggagcctttaatgatctttcagcattg
tcacacctggctattggcgcaaatcctctttattgtgattgtaatatgcagtggctatct
gactgggtaaaatcagaatacaaggaacctggtattgcacgttgtgctggtcctggtgaa
atggcagataaacttcttcttacaactccttctaagaaatttacttgccaagggcctgtg
gatgttaatattcttgcaaagtgtaatccctgtttgtcaaatccatgtaaaaatgatgga
acctgcaataatgatccagttgacttctacagatgcacgtgcccatatggtttcaagggt
caagactgtgatattcccattcatgcttgcattagtaacccgtgccagcatggtggaact
tgtcatttgaaagaaggagaaaaagatggtttctggtgcacttgtgcagacggatttgaa
ggtgaaaactgtgaagtaaatgttgatgactgtgaagacaatgactgtgaaaacaattcc
acttgtgtggatggaattaataactatacttgcctttgtccacctgaatatacagctgct
aatctgaatgaagtggaaaaaggtgaactctgtgaggagaaattagatttctgtgcccaa
aacctgaatccttgccagcatgattcaaagtgtatcgtgacacccaaaggatacaaatgt
gattgcacacctggatatgtaggtgagcactgtgatattgactttgatgactgccaggac
aacaagtgtaaaaacggagcgcagtgcactgatgcagttaatggatacacgtgcgtttgc
ccagaagggtacagtggcttgttttgtgagttttcaccgccaatggttctacctcgcacc
agcccttgtgataattacgaatgtcaaaatggggcccagtgtatcataaaagaaagtgaa
ccaatctgtcagtgtttatcaggctaccagggtgagaaatgtgaaaagctgattagtata
aactttgtcaacaaagagtcctatctgcaaatcccttcagctaagatacgcccccaaacc
aatatcactctacagattgccacagatgaagacagtgggatcctgctgtacaaaggcgat
aaagatcatatagcagtggaactgtaccggggtagagtgagggtcagctatgacacagga
tcatatccagcctctgctatttacagtgtggaaacaattaatgatggcaatttccacatt
gtggagctgctagctatggatcagattctatctttatctattgatggaggaaaccccaag
ataattaccaatttgtccaaacaatccactctgaactttgattctccgctgtatgtagga
ggcatgcctgtgaaaaacaacatagcagctttgcgccagtcgccagggcagaatggcact
agcttccatggctgcatccgtaatctgtacatcaacagcgaactccaggacttcagaaat
gtgcccctgcaagtgggaattctgccaggttgtgagccttgtcataagaaagtttgtgtg
catggcacatgccacgctaccagccagtcaggcttctcctgtgagtgcgaaggcggctgg
accggaccgctctgtgaccaacaaaccaacgacccatgtctcggaaataaatgtgtgcat
ggtacctgcttgccgatcaatgcattttcatacagttgtaaatgcctgcagggacatggg
ggagtcctctgtgatgaagaggaaatgctgcttaacccctgccaatccatcaggtgtaaa
catggcaaatgtaggctttcaggacttgggaaaccatattgcgaatgcggcagcggatac
acgggggacagttgtgataaagaaatctcttgtcgaggggaacgagtccgagattactac
caaaagcagcaagggtatgctgcgtgccagacgaccaagaaggtatcgagactagaatgt
aaaggcgggtgctccgccgggcagtgctgcgggcccctgcggagcaagcggcggaaatac
tccttcgagtgcaccgacgggtcctcctttgtggacgaggttgaaaaagtggtgaagtgt
ggctgtacaaattgtccctcctaa
DBGET
integrated database retrieval system
