Passer montanus (Eurasian tree sparrow): 120498448
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Entry
120498448 CDS
T07277
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
120498448 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoa03400
]
120498448 (XRCC5)
DNA repair and recombination proteins [BR:
pmoa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
120498448 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA_2
POPDC1-3
Motif
Other DBs
NCBI-GeneID:
120498448
NCBI-ProteinID:
XP_039557123
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MAAGGKVATVLCLDVGLTMSSSSPGEESSLEQAKKIMTKFVQRQVFAESKDEVAVVLFGT
NGTRNGLASEDQYQNITVHRSLMLPDFDLLEDIQSVIKAGSKQADFLDAIIVCMDLLQKQ
TIGKKCEKRHIELFTDLNSPVSEDQLGIIIANLKKTGTSLQFFLPFPVSVDDGSGDTSAS
VHAHMHRNSSPIKGLTEQQKQGVDVVRKLMYTLDEEGGLEEIYTFRESLERLSMFKKMER
KPMPWPCQLTIGPNLSIRIVAYKSVTEERVKKLWAIVDAKTLRKEDVQKETVYCLNDDDE
TEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEGKCFSVLGFTRSSQIQRHYYMGNQAL
KVFAAKGDENAAVAFSALVRALDELKVVAVVRYAYDRRCYPQIGVAFPCIKDAYECLIYV
QLPYMEDLRQYVFSSLKNSKKCLPTVDQLSAVDSLIDSMNLVQEDGETFEDLFKPSKIPN
PHFQRLYQCLQHKAFHSDKPLPPIEQHLLEMLDMPCVVRERCQAPLERVKALFPLKEVGK
KKEEKTAQDIFKDNEDEPSLKKPKIEDEEESFSLMKLAEGNITSVGSVNPAEDFRILVRK
KNADFKDVSQQLINRIDQFLENKGSQYYMKGIDCIRVFREEAMKLSKVQCFNDFLQELKS
KLEDKALSDFWEIMVQERISLITKDEAEGSLVTGEEAEKFLAPKEQKNETLPPTDEGGDV
DDLLDMM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcggcaaggtggcaacagtgctgtgcctggatgtaggccttacaatgagc
agctcttcccctggtgaagagtcttcacttgagcaagccaagaagattatgacaaagttt
gtgcagcgacaggtttttgctgagagtaaagatgaagtcgctgtagttctgtttggcact
aatggcactagaaatggccttgccagtgaggatcaataccaaaacattactgtacataga
tcactaatgctgccagattttgatctgctggaagacattcaaagtgtgattaaagcaggc
tctaaacaagcagactttttggatgctattattgtgtgtatggacttgcttcagaagcag
acaataggaaagaaatgtgagaagagacacattgaactgtttacagaccttaatagtcct
gtcagtgaggatcagctgggaattatcattgctaacttgaagaaaacaggaacttctctt
cagttttttctgccattcccagtgagtgttgatgatggaagtggagatacaagtgccagt
gtacatgctcatatgcacagaaactcttctccaataaagggtttaactgaacaacaaaag
caaggtgttgacgtggtgaggaagctcatgtatactttggatgaagaaggagggctggaa
gaaatttatactttcagagagagcctggaacgtctttcaatgtttaagaaaatggaaagg
aagcctatgccttggccctgccagctcactattggtcctaatttgtctataaggattgtg
gcctacaaatcagtcacagaagagagggtgaaaaaactttgggcaattgtggatgctaaa
accctcagaaaagaggatgtgcaaaaagaaactgtttactgcttgaatgatgatgatgag
acagaggttcagaaagatgatactattcaaggttttcggtatgggagtgatatagttcct
ttttccaaggaagatgaagagcaaatgaaatacaaaacagaaggaaagtgtttttctgtt
ttgggattcactagatcctctcagatccagaggcattactacatgggcaaccaagctctg
aaggtctttgcagcaaaaggtgatgagaatgcagcagttgctttttctgcacttgttcgt
gccctggatgagttgaaagtggtggctgtagtgcgctatgcttatgatagaagatgctat
ccacaaattggagtagcttttccgtgtattaaggatgcatatgagtgtctcatctatgtg
cagctaccctatatggaagacctaagacaatatgtattttcatccttgaaaaacagtaaa
aaatgccttcctacagtggatcagttatctgctgttgactcactgattgattcgatgaat
ttggttcaagaagatggagaaacttttgaggacctatttaagcccagcaaaattccaaac
cctcattttcaaagattatatcagtgtttgcagcacaaggcttttcactctgataagcca
ctgccaccaatagagcagcaccttttagaaatgctggatatgccttgtgtggtaagagaa
aggtgtcaggctcctctggaaagagtaaaagcactttttcccctaaaggaagttggcaag
aaaaaagaagagaagactgcacaagacatcttcaaagacaatgaagatgaacccagcctt
aagaaaccaaaaattgaagatgaggaagagagctttagccttatgaaacttgctgaaggc
aatatcacctctgtaggcagtgttaacccagcagaagatttccgaattctggtgaggaag
aaaaatgctgacttcaaagatgtgagtcagcagttgataaaccgcattgatcagttcttg
gaaaataaaggttcccagtactacatgaaagggattgactgtatcagagtttttagagag
gaggccatgaagctgtccaaggtgcagtgctttaatgactttctgcaggaactgaaatca
aagttggaagataaagccttatctgatttctgggagattatggtacaagaaagaatttct
ttgatcactaaagatgaagcggaaggaagtttggtgacaggtgaagaggctgagaagttc
ttggctccaaaagaacagaaaaatgaaactctgcctcctacagatgaaggtggtgatgtt
gatgatttgctggacatgatgtga
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