Passer montanus (Eurasian tree sparrow): 120498763
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Entry
120498763 CDS
T07277
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmoa03000
]
120498763 (SOX30)
Transcription factors [BR:
pmoa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120498763 (SOX30)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
120498763
NCBI-ProteinID:
XP_039557793
LinkDB
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Position
Unknown
AA seq
622 aa
AA seq
DB search
MERRVRHCRFRARASPASPPRHREVMGPLGGLRVPVQEHPSRPGHSEGAAKKSRCISAPA
AVEKEARSAVRRDRDHERGSGDRQNEEKVLEQTGNKSWRRAAVQTERANATYEARPVKGE
KSDAPAASLCELGNPPQDQNIPVLFQPLPARSHVQLQGPLSSQLMHVTPVPVKQVPVQLQ
PLLQRPKIETKNVPLTVLPSDSGMPDTPFSKTKSGRVKRPMNAFMVWARIHRAAVAKANP
GANNAEISVQLGLEWSKLTEEQKQPYYEEANKIKLRHREEFPGWVYQPNKKKCSPPPGAA
AFSGTSQSTIATNPAGTLSFSTPTYSFVNTSVKNSIGRPICESPAIHLPASSIQHAVPMT
LFQTTAASTTSVAVAVPTLPLHPVVSSQHFAEPAQTEAFVSPGLNFSLKRPAPVFAESFS
NRNPSNISSTSGRFSVSSTEIPGISVFPRGVALPQATPFIPSPAYVSAPIGQPASLFGGA
PQFPFCHPSFIPGPRCFPSSTFPLRAPFGYGNFSSSVPQCFGFYEERNQRQEVIFSTLDE
DYSFRAYSEERLCENQRVCGSPEVVSCQSTCSEERVLSPLPQLDVEVVEEVLPSPPSTPS
STYIVNVTDSDEEEEVKFFQVL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcagggtcaggcactgccgcttccgcgcccgggcgagccccgcctcgcccccc
aggcacagggaggtcatgggccccctcggagggctgcgcgtcccagtgcaggagcacccg
agccggcccgggcacagcgagggagcggcgaagaagagcaggtgcatctcggctccggcg
gcggttgagaaagaggcccggagtgctgtcaggagagacagggaccatgagaggggcagc
ggtgaccgccagaacgaggagaaggtcctggagcaaactgggaataagtcctggagaaga
gctgccgtccaaacggagcgagccaacgcgacctatgaggcccgcccagtgaagggggag
aagagcgatgccccggctgcatccctgtgcgagcttgggaaccctccgcaagatcagaat
atcccggtcttgtttcagcccttacctgccaggtcccatgtccagctccaaggcccgctt
tcctcgcagctgatgcatgtgactccagtgccggtaaaacaagtgccagttcaattgcag
cctctactgcagcggccaaagattgaaacaaaaaacgttcccctcacagtcctgccctcg
gattcagggatgccagacactccattcagcaagaccaagagtggccgtgtgaagcgtccc
atgaacgcgttcatggtgtgggccaggatccacagggctgctgtggccaaagccaacccg
ggggccaacaacgccgagatcagcgttcagctcggcctggagtggagcaaactcactgaa
gagcagaagcagccctattacgaggaagctaacaaaataaaactgaggcacagggaggaa
tttcctggttgggtttatcagccaaacaaaaagaagtgttctccaccacctggcgctgct
gcattttcaggcacttcccagagtaccatcgctacaaatccagctggcaccctttccttc
tcaacacctacttactcttttgtcaacaccagtgttaagaacagtattggacgtccaatc
tgtgagtctcccgccatccatctgccggcttcttccatccagcacgctgtgcccatgacc
cttttccagaccacggctgcaagcaccacatcagtggcagttgcagttccaaccctgccc
ctgcaccctgtagtttcatcacagcactttgctgaacctgctcagacagaagcttttgta
tcacctgggctcaatttctccctgaagagacctgcacccgttttcgctgagagcttcagc
aacagaaacccgagtaacatcagcagcactagtggcaggttttctgtctctagcactgag
atcccagggatttctgtttttcctagaggcgtagctcttccccaggctaccccttttatt
ccctcacctgcctacgtgtctgctcccattggacaaccagccagtttgtttggaggagct
cctcagtttccattttgccacccttcctttatacctggacctcgctgtttcccctcaagc
acattcccactcagagctccctttggctacgggaatttctccagctcagtgcctcagtgc
tttggcttttatgaggagaggaaccagaggcaggaggtgatattttccactctggatgaa
gactatagtttcagggcatactcagaggagaggctgtgtgagaaccagcgtgtctgtggg
agccctgaggtggtgtcctgccagagcacctgcagcgaggagcgagtgctgagccccctg
ccacagctggacgtggaggtggtagaggaggttctgccatcccccccatctactccctcc
agcacttacattgtcaatgtaactgacagtgatgaggaagaggaagtaaagttttttcaa
gtattgtaa
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