KEGG   Passer montanus (Eurasian tree sparrow): 120498812
Entry
120498812         CDS       T07277                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120498812 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmoa03019]
    120498812 (NUP54)
Messenger RNA biogenesis [BR:pmoa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120498812 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 120498812
NCBI-ProteinID: XP_039557906
LinkDB
Position
Unknown
AA seq 580 aa
MPFLPMGMEKCFSFSFVGPAFHSELMLPCSFSASRSSGFGGLETANSTASGFNFGGFGLT
ANPTVNFNIGNFGVSTTSTPPFNFGNSLASAGAFGGFGTTTTTAAPAFSFSAPTNTGTGG
LFGGTQNKGFGFGTSFGTGTGTGLGSGLGTGLAFGGFGTQQQQQQQQQQTTLGTGLFNQP
AQAPAQSNQLINTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQE
NPFCRFKAVGYSLMPNNKDEDGLVVLVFNRKEADIRSQQQQLVESLHKILGGNQTLTVNV
EGVKTMPDDQTEVIIYIVERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTE
LSPAQVKQLLQNPPAGVDPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQH
QTRLDIISEDISELQKNQTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADE
EQLRVQLDTIQCELNAPTQFKGRLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHL
KQQQEGLSHLISIIKDDLEDIKLIEHGLNESIPIRGGVFS
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgcctttcttgcccatggggatggaaaaatgcttcagcttttctttcgtgggacctgcc
tttcactcagaactaatgttgccttgctctttttctgcttcccgctcgtcaggatttggt
gggcttgaaactgcaaactccacggccagtgggtttaattttgggggtttcggattaacc
gctaatcccacggtgaattttaatattgggaatttcggtgtttccactacctcaactcca
cctttcaattttggtaacagtctggcaagcgcaggtgccttcggaggctttgggaccacc
accaccaccgcggcaccggcgttcagcttctctgctcccaccaacaccggcaccggcgga
ctctttggtggtacccagaacaaaggctttggatttggtaccagttttggcacaggaact
ggaactggcttgggtagtgggctgggaactgggctagcctttggaggctttggaacccag
cagcagcagcagcagcagcagcagcagaccacattaggcacgggattgttcaaccagcct
gcccaggcacccgctcagtccaaccagctcattaacacagccagtgccctctcggccccg
acactgctgggagatgagagggatgccattctggccaaatggaaccagctccaggccttc
tggggcacgggcaaagggtacttcaacaacaacatcgctcccgtggagttcacgcaggaa
aaccccttctgcaggtttaaggctgtgggttacagtttaatgcccaacaacaaagatgaa
gatggcctcgtggtcttggtgtttaacagaaaagaagcagatattcgaagccagcagcag
cagcttgtagaatcattacacaaaattttggggggaaaccagaccctcactgtcaatgtc
gaaggtgttaaaacgatgcctgatgaccagacagaagtgatcatttacattgtggagcgc
tcccccaatggtacctcgaggagagttcccgcaacaaccctctacgcccactttgagcaa
gccaacatcaaatcatccctgcagcagctgggggtcagcctgtccatggccaggacagag
ctgtccccggcacaagtcaagcagctcctgcagaatcctcctgccggtgttgatcctatt
atatgggaacaagccaaagttgataatcccgatcctgataagcttattcctgtgccaatg
gtgggtttcaaggaattgctgagaagattgaaggtccaggatcagatgaccaaacagcat
caaactcgattagatataatatcagaagatatcagtgagctgcagaaaaaccaaacaaca
actatggcaaaaattgcacagtacaaaaggaaactgatggcgctttcgcacagaaccttg
caggtgctaataaagcaggagatccaaaggaaaagtggttatgccattcaagcagatgaa
gagcagcttcgtgtacagttggatacaattcagtgtgaacttaatgcacccacgcagttc
aagggcagactgaatgagctcatgtcccagatcaggatgcagaaccactttggagcagtg
cgggctgaagagcgctattacatagatgcagacctcttaagggaaatcaagcaacacctg
aagcagcagcaagaagggctgagtcacctaatcagcatcatcaaggatgacttggaggac
atcaagctaatagaacacgggctgaatgagagcattcccatccgaggaggagtcttcagt
tga

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