Passer montanus (Eurasian tree sparrow): 120498812
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Entry
120498812 CDS
T07277
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120498812 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120498812 (NUP54)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120498812 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
120498812
NCBI-ProteinID:
XP_039557906
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MPFLPMGMEKCFSFSFVGPAFHSELMLPCSFSASRSSGFGGLETANSTASGFNFGGFGLT
ANPTVNFNIGNFGVSTTSTPPFNFGNSLASAGAFGGFGTTTTTAAPAFSFSAPTNTGTGG
LFGGTQNKGFGFGTSFGTGTGTGLGSGLGTGLAFGGFGTQQQQQQQQQQTTLGTGLFNQP
AQAPAQSNQLINTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQE
NPFCRFKAVGYSLMPNNKDEDGLVVLVFNRKEADIRSQQQQLVESLHKILGGNQTLTVNV
EGVKTMPDDQTEVIIYIVERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTE
LSPAQVKQLLQNPPAGVDPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQH
QTRLDIISEDISELQKNQTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADE
EQLRVQLDTIQCELNAPTQFKGRLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHL
KQQQEGLSHLISIIKDDLEDIKLIEHGLNESIPIRGGVFS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcttgcccatggggatggaaaaatgcttcagcttttctttcgtgggacctgcc
tttcactcagaactaatgttgccttgctctttttctgcttcccgctcgtcaggatttggt
gggcttgaaactgcaaactccacggccagtgggtttaattttgggggtttcggattaacc
gctaatcccacggtgaattttaatattgggaatttcggtgtttccactacctcaactcca
cctttcaattttggtaacagtctggcaagcgcaggtgccttcggaggctttgggaccacc
accaccaccgcggcaccggcgttcagcttctctgctcccaccaacaccggcaccggcgga
ctctttggtggtacccagaacaaaggctttggatttggtaccagttttggcacaggaact
ggaactggcttgggtagtgggctgggaactgggctagcctttggaggctttggaacccag
cagcagcagcagcagcagcagcagcagaccacattaggcacgggattgttcaaccagcct
gcccaggcacccgctcagtccaaccagctcattaacacagccagtgccctctcggccccg
acactgctgggagatgagagggatgccattctggccaaatggaaccagctccaggccttc
tggggcacgggcaaagggtacttcaacaacaacatcgctcccgtggagttcacgcaggaa
aaccccttctgcaggtttaaggctgtgggttacagtttaatgcccaacaacaaagatgaa
gatggcctcgtggtcttggtgtttaacagaaaagaagcagatattcgaagccagcagcag
cagcttgtagaatcattacacaaaattttggggggaaaccagaccctcactgtcaatgtc
gaaggtgttaaaacgatgcctgatgaccagacagaagtgatcatttacattgtggagcgc
tcccccaatggtacctcgaggagagttcccgcaacaaccctctacgcccactttgagcaa
gccaacatcaaatcatccctgcagcagctgggggtcagcctgtccatggccaggacagag
ctgtccccggcacaagtcaagcagctcctgcagaatcctcctgccggtgttgatcctatt
atatgggaacaagccaaagttgataatcccgatcctgataagcttattcctgtgccaatg
gtgggtttcaaggaattgctgagaagattgaaggtccaggatcagatgaccaaacagcat
caaactcgattagatataatatcagaagatatcagtgagctgcagaaaaaccaaacaaca
actatggcaaaaattgcacagtacaaaaggaaactgatggcgctttcgcacagaaccttg
caggtgctaataaagcaggagatccaaaggaaaagtggttatgccattcaagcagatgaa
gagcagcttcgtgtacagttggatacaattcagtgtgaacttaatgcacccacgcagttc
aagggcagactgaatgagctcatgtcccagatcaggatgcagaaccactttggagcagtg
cgggctgaagagcgctattacatagatgcagacctcttaagggaaatcaagcaacacctg
aagcagcagcaagaagggctgagtcacctaatcagcatcatcaaggatgacttggaggac
atcaagctaatagaacacgggctgaatgagagcattcccatccgaggaggagtcttcagt
tga
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