KEGG   Passer montanus (Eurasian tree sparrow): 120499129
Entry
120499129         CDS       T07277                                 
Symbol
SNRNP200
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120499129 (SNRNP200)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmoa03041]
    120499129 (SNRNP200)
Enzymes [BR:pmoa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     120499129 (SNRNP200)
Spliceosome [BR:pmoa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    120499129 (SNRNP200)
 Complex C
   U5 SnRNP specific factors
    120499129 (SNRNP200)
SSDB
Motif
Pfam: Sec63 SNRNP200_wHTH DEAD Helicase_PWI ResIII Helicase_C BRR2_plug AAA_22 AAA_30 PhoH SWI2_SNF2 DUF603 Hikeshi-like_C
Other DBs
NCBI-GeneID: 120499129
NCBI-ProteinID: XP_039558555
LinkDB
Position
Unknown
AA seq 2136 aa
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEVELLLGPTDDTRYHVLVNLGKKIT
DYGGDKDIQNMDDNIDETYGVNVQFESDEEEGDEDIYGEVRDEASDDDLEGDEAVVRCTL
SANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFL
YQLHETEKEDLIREERSRRERVRQSRMDTDLESMDLDQGGEALAPRQVLDLEDLVFAQGS
HFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGADEQLVSVEKLPKYAQAGFEGFKT
LNRIQSKLFRAALESDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIY
IAPMRSLVQEMVGSFSKRLATYGITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKG
GERTYTQLVRLVILDEIHLLHDDRGPVLESLVARAIRNIEMTQEDVRLVGLSATLPNYED
VATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVAKLPDM
LNAEAVLGNVQNAKDAVNWLGYTYLYIRMLRSPTLYGISHDDLKADPLLEQRRLDLVHTA
ALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNETVQTYNQLLKPTLSEIELFRVFSL
SSEFRNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMAD
MVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFKKLPEEVV
KKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKV
ELTIAPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLVTFFVPVFE
PLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESL
YQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQNSEGRCVYIT
PMEALAEQVFMDWYEKFQERLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWK
QRKNVQNVNLFIVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDV
AHWLGCSATATFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAVMKHSPKKPVL
VFVPSRKQTRLTAINILTTCASDVQRHRFLHCAEKDLVPYLEKLSDPTLKETLVNGVGYL
HEGLTAMERRVVEQLFSSGAVQVMVASRSLCWGMNISAHLVIIMDTQYYNGKIHAYVDYP
IYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGVSHRHLSDHLSELVEQTLSDLEQSK
CISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLLEIISNAAEYENIPI
RHHEDNLLRQLSQKVPHKLTNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAI
RLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVE
SVFDIMEMEDEERTALLQLPEAQIADVARFCNRYPNIELSYEVGDRDSIRSGGPVVVLVQ
LEREEEVTGPVIAPLFPQKREEGWWVVIGDSKSNSLISIKRLTLQQKAKVKLDFVAPAAG
TQHYTLFFMSDAYMGCDQEYKFSVDVKEAESDSESD
NT seq 6411 nt   +upstreamnt  +downstreamnt
atggcggacgtgaccgcccgtagcctgcagtatgagtacaaagcgaactccaacctggtg
ctgcaggccgaccgctcgctgatcgaccgcacgcgccgggacgagcccacgggggaggtg
ctgtccctggtggggaagctcgaggggacccgcatgggggacaaggcgcagagaaccaag
ccccagatgcaggaggagaggagagccaagaggaggaagagggacgaggacaggcacgac
atcaacaagatgaagggctacaccctgctctccgagggcatcgacgagatggtgggcatc
atctacaagcccaagaccaaggagacgcgggagacctacgaggtgctcctcagcttcatc
caggctgccctgggcgaccagccccgggacatcctgtgtggagcagctgacgaggtgctg
gccgtgctgaagaacgagaagctgcgggacaaggagcggcgcaaggaggtggagctgctg
ctgggccccaccgacgacacgcgctaccacgtgctggtcaacctgggcaagaagatcacc
gactacggcggggacaaggacatccagaacatggatgacaacattgacgagacctacggg
gtgaacgtgcagttcgagtccgacgaggaggagggggacgaggacatctacggggaggtt
cgggacgaggcgtcggacgatgacctggagggggacgaggccgtggtgcgctgcacgctc
tcggccaacctggtggcctcgggggagctgatgagctccaagaagaaggatctccacccg
cgggacatcgacgccttctggctgcagcgccagctcagccgcttctacgacgacgccatc
gtctcccagaaaaaggcagacgaggtcctggagatcctcaagactgccagtgatgaccgg
gaatgtgagaaccagctggtgctgctgctgggcttcaacaccttcgacttcatcaaggtc
ctcaggcagcacaggatgatgatcctgtactgcaccttgctggccagcgcgcagagcgag
gcggagaaggagcgcatcatgggcaagatggaggccgaccccgagctctccaaattcctc
taccagctccacgagacggaaaaagaggatctgatccgggaggagcgctcccggcgggaa
cgcgtgcgccagtcccgcatggacaccgacctggaatccatggatctggaccagggggga
gaggctctggctcccaggcaggtgctggatttggaggatctggtgtttgcccagggcagt
cacttcatggccaacaagaggtgccagctcccggatggatccttccggagacagcgcaag
ggatatgaggaagttcatgttcctgccctaaaacccaaaccctttggggctgatgagcaa
ttggtttctgtggaaaaacttcccaagtacgcccaagctggctttgaaggcttcaaaacc
ctcaacaggatccagagcaaactgttccgggcggcgctggagtccgacgagaacctgctg
ctctgtgcccccacgggcgcggggaagaccaacgtggcgctgatgtgcatgctgagggag
atcggcaaacacatcaacatggacggcaccatcaacgtggacgacttcaagatcatctac
atcgcgcccatgaggtccctggtgcaggagatggtcgggagcttcagcaagcgtttggcc
acctacgggatcacggtggccgagctgaccggggaccaccagctgtgcaaggaggagatc
agcgccacgcagatcattgtgtgcacgcccgagaagtgggacatcatcacccgcaagggc
ggcgagcgcacctacacccagctggtgcggctggtcatcctggatgagatccatctcctc
cacgacgaccgcgggcccgtgctggagtcactggtggccagggccatccgcaacatcgag
atgacgcaggaggacgtgcggctggtggggctcagcgccacgctgcccaactacgaggac
gtggccaccttcctgcgggtggacccggccaagggcctgttctacttcgacaacagcttc
cggcccgtgcccctggagcagacctacgtgggcatcacggagaagaaggccatcaaacgc
ttccagatcatgaacgagatcgtctacgagaagatcatggagcacgccggcaagaaccag
gtgctggtgttcgtgcactcgcggaaggagaccgggaagacagcgcgggccatccgggac
atgtgtctggagaaggacacgctggggctcttcctcagggaggggtcggcctccaccgag
gtgctgcggacagaggctgagcagtgcaagaacctggagctgaaggatctcctcccctac
ggcttcgccatccaccacgccgggatgacgcgcgttgaccgcaccttggtggaggatctc
ttcgccgacaaacacatccaggtcctggtgtccacggccacgctggcctggggtgtgaac
ctgccggcgcacacggtgatcatcaaaggcacgcaggtgtacagcccggagaaggggcgc
tggaccgagctgggagccctggacatcctccagatgctgggccgtgccgggaggccccag
tatgacacgaaaggagaaggaattctcatcacttcccacggagagctccagtattacctg
tccctgctcaaccagcagctgcccatcgagagccagatggtggccaagctcccggacatg
ctcaacgctgaggccgtgctcgggaatgtccagaatgccaaggacgcggtgaactggctg
ggctacacctacctgtacatccggatgctgcggtcgccgaccctttacggcatctcccac
gacgacctgaaggcggatccgctcctggagcagcggcgcctcgacctcgtccacaccgcg
gccctgatgctcgacaagaacaacctggtcaagtacgacaagaaaaccgggaatttccag
gtgacggagctgggccgcatcgccagccattactacatcaccaacgagacggtgcagacg
tacaaccagctgctgaaacccaccctgagtgagatcgagctcttccgcgtcttctccctg
tcctcagagttccgcaacatcaccgtgcgcgaggaggagaagctggagctgcagaagctt
ctggagcgagtcccgatcccagtgaaggagagcatcgaggagcccagtgccaagatcaac
gtgctgctccaggccttcatctcgcagctgaagctggagggcttcgccctcatggccgac
atggtctacgtcacccagtcggccgggaggctgatgagagccatctttgagatcgtcctg
aaccgcggctgggcccagctcaccgacaagaccctcaacctctgcaagatgatcgacaag
cgcatgtggcagtccatgtgtcccctgcgccagttcaagaagctgcccgaggaggtggtg
aagaagattgagaagaagaatttcccctttgagcgcctctacgacctcaaccacaacgag
atcggagagctgatccggatgccgaaaatggggaaaaccatccataaatacgtgcacctg
ttcccgaagctggagctgtccgtgcacctgcagcccatcacgcgctccacgctcaaggtg
gagctcaccatcgcgcccgacttccagtgggacgagaaggttcatggctcctctgaggcc
ttctggatcctggtggaggatgtggacagcgaggtgatcctgcaccacgaatatttcctg
ctcaaggccaaatatgcccaggatgagcacctggtgacattttttgtgcccgtcttcgag
cccctgcccccccagtatttcatccgggtggtgtccgaccgctggctctcctgtgagacc
cagcttcccgtttccttccggcacctgatccttccggaaaaatacccgccgcccacggag
ctgctggacctgcagccgctgccggtgtcggcgctgcgcaacagcgccttcgagagcctc
taccaggacaagttccccttcttcaaccccatccagactcaagtgttcaacacggtgtac
aacagcgacgacaacgtcttcgtgggcgcgcccacgggcagcggcaaaaccatctgcgcc
gaattcgccatcctccgcatgctcctgcagaactccgagggccgctgcgtctacatcacc
cccatggaggccctggccgagcaggttttcatggattggtacgagaaattccaggagcgc
ctcaacaagaaggtggtgctgctcacgggggagaccagcacggacctgaagctgctggga
aaagggaacatcatcatcagcaccccggaaaagtgggatatcctctcccgccgctggaag
cagcgcaagaacgtccagaacgtcaacctgttcatcgtggatgaagtgcacctgatcggg
ggcgagaatgggcccgtgctggaggtgatctgctcgcgcatgcgctacatctcgtcgcag
atcgagcggccgatccgcatcgtggcgctgagctcgtcgctgtccaacgccaaggacgtg
gcacactggctgggctgcagcgccaccgccaccttcaacttccaccccaacgtgcgcccc
gtgcccctggagctgcacatccagggtttcaacatcagccacacgcagacgcggctgctg
tccatggccaagcccgtgtaccacgccgtgatgaagcactcgcccaaaaaacccgtcctg
gtcttcgtcccgtcccgcaaacagacccggctcactgccatcaacatcctgaccacctgc
gcctctgacgtccagcgccacaggttcctgcactgcgctgagaaggacctggtgccgtac
ctggagaagctgagcgaccccacgctgaaggagacgctggtgaacggcgtgggctacctg
cacgaggggctcacggccatggagcggcgcgtggtggagcagctcttcagctccggagcc
gtgcaggtgatggtggcctcgcgcagcctctgctggggcatgaacatctcggcccacctg
gtgatcatcatggacacgcagtactacaacggcaagatccacgcgtacgtggattacccc
atctacgacgtgctgcagatggtcggccacgccaaccgcccgctgcaggacgacgagggg
cgctgcgtcatcatgtgccagggctccaagaaggatttcttcaagaagttcctgtacgag
ccgctgccagtggagtctcacctggaccactgcatgcacgaccacttcaacgccgagatc
gtcaccaagaccatcgagaacaagcaggacgccgtggactacctgacctggaccttcctg
taccgcaggatgacccagaaccccaactactacaacctgcaaggcgtgtcccaccggcac
ctgtcggatcacctgtcggagctggtggagcagaccctcagcgacctggagcagtccaag
tgcatcagcatcgaggacgagatggacgtggcgcccctcaacctgggcatgatcgccgcc
tactactacatcaactacaccaccatagaactgttcagcatgtccctcaacgccaagacc
aaggtgcgggggctgctggagatcatctccaacgccgccgagtacgagaacatccccatc
cggcaccacgaggacaacctgctgcgccagctgtcccagaaggtgccccacaaactgacc
aaccccaaattcaacgacccccacgtcaagaccaacctgctgctccaggcccacctgtcg
cgcatgcagctgagcgccgagctgcagtccgacaccgaggagatcctcagcaaggccatc
cggctgatccaggcctgcgtggacgtgctctccagcaatgggtggctgagcccggcgctg
gccgccatggagctggcccagatggtcactcaggccatgtggtccaaggactcgtacctg
aagcagctgccccacttcacctcggagcacatcaaacgctgcacggacaagggcgtggag
agcgtatttgacatcatggagatggaggacgaggagcgcacggcgctgctgcagctgccc
gaggcgcagatcgccgacgtggcgcgcttctgcaaccgctaccccaacatcgagctgtcc
tacgaggtgggggacagggacagcatccgcagcggtggccccgtggtggtgctggtgcag
ctggagcgtgaggaggaggtcacggggccggtcatcgcccccctgttcccgcagaagcga
gaggagggctggtgggtggtgatcggtgactccaagtccaacagcctcatctccatcaaa
cgcctgacgctgcagcagaaggccaaggtgaagctggacttcgtggcgccggcggcgggc
acgcagcactacacgctgttcttcatgagcgacgcctacatgggctgcgaccaggagtac
aagttcagcgtggacgtcaaggaggccgagagcgactccgagtccgactga

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