Passer montanus (Eurasian tree sparrow): 120499208
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Entry
120499208 CDS
T07277
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120499208 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmoa01009
]
120499208 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmoa04131
]
120499208 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
pmoa03029
]
120499208 (RB1CC1)
Protein phosphatases and associated proteins [BR:
pmoa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120499208 (RB1CC1)
Membrane trafficking [BR:
pmoa04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120499208 (RB1CC1)
Mitochondrial biogenesis [BR:
pmoa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120499208 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
120499208
NCBI-ProteinID:
XP_039558695
LinkDB
All DBs
Position
Unknown
AA seq
1605 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLYKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLESSPEHGGAESEGTEDGKSP
ELVLYSDVSKANSKSMLASFCKSVEHSALEGTDPENVKDDKESGQNATVQDNEMSVELKD
DDQPSFNVSLLDWINVQDRLNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMES
TTGTAITTSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSVENASLSVCVEKCRVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLNDKHQNELQSLKSEYETKIKKLLEDGEENKKKIKKL
KGDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNSEIKELRQSR
EIVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHKDCLD
KLKKENEHRLEQMQESHEVVMQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLRSQVDKETESLRKEIDKLNNKIQISSDEYQVGLSELRTLMTIEKDQ
CISELINRYEEESNLLRTELDKVTLLHQKTAEAEKRLSEQITELQSKLELEMTALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLISNQEQDRQMLIQKLNCEKEDAVQTACKELELQR
EAAEKGLLEKITQLEMQVNQSPAESSAESNLVAELQEKLQEEKMKFLEQLEEQEKRKNEE
MQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDRA
RLLEEKKKLEEEVSKLRSSNFSPSTYLAAASEACGACAADVPTDTERLVADFGAEGRMDS
TMETSMMAVHENVHMSEEKQRIMLLERVSRLFICETLQLKEEENKRLNQRLMSQSMSSVS
SRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGA
SRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacatttgatactgaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagattgccatt
cagcaccaagtactggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacattttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgcagtgtttcatacagtagcatcgcgaacacag
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccatcatggccaacttggaagattgt
acatactcttaccaaaagctgctttacaagtttgaaaatgtgtattcaagctatttgcag
tccatagatgatatcaaattgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccactgctggagtgcctaacaagacatagttacagagagtgtttaggaagactg
gagtcttcacctgagcatggaggagcagaaagtgaaggaactgaggatgggaaatctcct
gaattggtgctttattcggatgtatctaaagcgaacagtaaatcaatgttagcatcattt
tgcaagtcagttgaacattcagctttggaaggcacagatcctgaaaatgtaaaagatgat
aaggaatctggtcaaaatgctactgtccaggacaatgaaatgtcagtagaattgaaagat
gatgatcagccttccttcaatgtgtctttgttagactggataaatgttcaagatagactt
aatgatgttgaatccctggtcagaaaatgtttcgattccatgagcaggcttgatccaagg
atcatccaaccctttctggcagaatgtcgccaaactatcgccaaactagataatcagaac
atgaaggctattaaaggtcttgaggacagactctatgcattggaccagatgatagcaagc
tgcagcagactggtgaatgaacagaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctgcaagtcagactgaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactacaagcactgcttcgtcttgtaacagag
ctcctagaaagggtcaaagttgtagaggctctcagcactgttcctcagatgtactgttta
gctgttgttgaagttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttgataaaagatgggaaacatctatatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactctttaggaagtcttttctaaggaatcgtttgtttagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctcg
ttgagtgatttgcagtttttgcagtctttctgtccttcagaagtacagccattactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtcaaggcagcacagagtttggatgaaatgtcacaaactattacagacctgctgaatgag
caaaaggcctccaatagtcaagcatcgccacaatctgctaccacaccaaggatggaaagt
actacaggaaccgcaattactacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtatgtcccccagctccattagaagaattgtctccggacagcatt
gatgctcacacgttcgattttgaaactattgcccatccgaacttggagcaagctcttaag
caaggatcgttagacttggattcattggcggagagtccagaatctgactttatgtcagca
gtaaatgaatttgtaatagaagaaaatccggtgtctcctaatgtaataagtgacccacaa
agcccagaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtagg
cgtatgcaagatacaagttcttgtgtaaaggatgtttcagtagaaaatgcttctctcagt
gtttgtgtggagaagtgtagggttattgctcaagactcaaaggtacatttaagaggtata
aaagaagatctttgccatttcagaacacttgtacaaagagaacagtgtgacttttctaat
tctttaaaatgtacttccttagaaatagtaaatacaattgaaaaggtaaagctttcactt
gaaaaaacactaaatgataaacatcaaaatgaattgcagtctttgaaaagtgagtatgaa
actaaaattaaaaaattattggaggatggtgaagaaaataaaaagaaaatcaaaaagtta
aaaggtgacctgttaggtcttgaagaagttcttcagaataagaatgatgaatttgcaata
gtaaagaatgagaaagaagctgtagtttgccttcagaatgaaaaagaccagaaattactt
gaattggaatgccaaatggaaacacagaattctgaaatcaaggaactgaggcagtcacgt
gaaattgtacttgaagacttgaaaaaacttcatgtcgaaaacaatgagaaactgcaactc
ctgagggcagaacttgagagtttagagcaaagccatttaaaagaactggaaagcaaccta
caagccaggcatttacaggaatttgagaaggtcctcgctgagcacaaggactgtttggat
aaattaaaaaaggagaacgagcatagacttgaacaaatgcaggagtctcatgaggtagtt
atgcaagagaaacaacaacaagtagaagagttacaactcaaggtttcagatctgtctgat
ttgaggtgcaaactagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaag
cttcttttggaagaaagcagaaaccagcaacaagagaccttaagatctcaggttgacaag
gaaactgaaagcttaagaaaggaaatagataaattaaacaataaaatacaaatcagcagt
gatgaatatcaagtgggattatcagaactaaggactctgatgacaattgagaaagatcag
tgtatttctgagctaataaataggtatgaagaagaatcaaatttgcttagaactgaatta
gataaagtaacgcttcttcatcaaaaaactgctgaggcagaaaaaagactttcagagcaa
ataacagaactgcaaagtaagttagagttggaaatgactgccctagagaaggaaaaaaca
gaaaaattgtctctctgtgagcaacaggaaaaatacgaagctattatccataagctaaag
gaagagaaagaactgttaatatctaaccaagaacaagacaggcagatgcttattcagaag
ctcaattgtgaaaaagaggatgcagtacaaactgcttgtaaagagttggaattacagagg
gaagctgctgaaaaagggcttttggaaaaaataacacaacttgagatgcaagtgaatcag
agtcctgctgaatcatctgctgaatcaaacttagtcgctgaacttcaggagaagcttcag
gaagaaaaaatgaagttcttagagcaacttgaagaacaagagaaaagaaagaatgaagaa
atgcagaacatcagaacatcgctcactgcagagcagcagaccaactttaacactgttctg
gcaagagagaaaatgaaaaaagaaaacattattaatgatcttagtgacaaattaaaagtg
cttacacaacagcaagaaaaagataaggatttgattgaaacactttctgaagatagagct
cgcttacttgaagagaagaagaaacttgaagaagaagttagtaaactgagaagtagtaat
ttttctccatcaacctacttggcagcagcatcagaagcctgtggggcctgtgcagctgat
gtgcccacagacacagagagattggttgctgactttggggctgaggggagaatggattcc
acgatggaaaccagtatgatggctgtgcatgaaaatgttcatatgtctgaagaaaagcag
aggataatgttgctagaaagagtgagtagattgtttatttgtgagactttacagttgaaa
gaagaggaaaataagagattaaatcaaagattgatgtcccaaagtatgtcatcagtatcc
tcaaggcattctgaaaaaatagcaattagagattttcaggttggcgatttagtactcatc
atcttggatgaaaggcatgacaactacgtgttgtttactgttagtccaaccttgtatttc
ttgcactcagagtcccttgctgcactggatctcaaaccaggtgagtgtgcgtcgggtgca
tctaggagaccatgggtgctaggaaaagtgatggaaaaggagtattgccaggcaaaaaag
gcacaaaacagattcaaagttcccttgggtacaaaattctacagagtgaaagcagtacca
tggaacaagaaagtataa
DBGET
integrated database retrieval system
