Passer montanus (Eurasian tree sparrow): 120499258
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Entry
120499258 CDS
T07277
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120499258 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmoa03000
]
120499258 (SOX17)
Transcription factors [BR:
pmoa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120499258 (SOX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
120499258
NCBI-ProteinID:
XP_039558799
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MSSPDAGYASSDDQVQGRCSLPMMMPAMCPWAESLSPLGEAKAKGGAAASGPSGGRSKGE
ARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPFVEEAERLR
VQHMQDHPNYKYRPRRRKQVKRLKRVESGFLQHGLAEAAGPGLGSEVSGGGGGRMCVEGL
GLAYGEQGYAAAAAGAGHYIYCPPLGAAFDGYGLPTPDPSPLDAAESEASFFAAGLQEEC
ALVPYGYGPHPSAAAEYPAAAAAASESPSYLSNLFESLWDWSTDFVWADISCSPDNPAGY
RTRPNFFSAGLNGMFTSFFLLFSLRVIIDIFAESAV
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgcgggctacgccagcagcgacgaccaggtgcaggggcggtgctcg
ctgcccatgatgatgccggccatgtgcccgtgggcagagtcgctgagcccgctgggcgag
gcgaaggcgaagggcggcgcggcggcgtcgggaccgtcgggcggccggagcaagggcgag
gcgcggatccggcgtcccatgaacgccttcatggtgtgggccaaggacgagcgcaagcgg
ctggcgcagcagaacccggacctgcacaacgccgagctcagcaagatgctgggtaaatcg
tggaaggcgctgtcgctggcggagaagcgtccgttcgtggaggaggcggagcggctgcgg
gtgcagcacatgcaggaccacccgaactacaagtaccggccgcggcggcggaagcaggtg
aagcgcctgaagcgggtggagagcggcttcctgcagcacggcctggcggaggcggcgggg
cccgggctgggcagcgaggtgtccggcggcggcggcggcaggatgtgcgtggagggcctg
ggactggcgtacggcgagcagggctacgcggcggcggcggcgggcgcgggccactacatc
tactgtccgccgctgggcgccgcgttcgacggctacggcctgccgacaccggacccgtcg
ccgctggacgcggcggagagcgaggcgtccttcttcgcggcggggctgcaggaggagtgc
gcgctggtgccctacggctacggcccgcacccgagtgcggccgccgagtacccggcggcg
gcggcggcggcgtccgagagcccgtcctatttatctaatttatttgaatccctttgggac
tggtccacggactttgtctgggcagacataagctgctctcccgataatcctgcaggctac
aggactcgtccgaacttcttttcggctggtcttaatggaatgtttacatcttttttcctc
cttttctcgttgcgcgtgattatcgatatttttgcagaatcagcagtctag
DBGET
integrated database retrieval system