Passer montanus (Eurasian tree sparrow): 120500357
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Entry
120500357 CDS
T07277
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04140
Autophagy - animal
pmoa04148
Efferocytosis
pmoa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120500357 (VPS18)
04148 Efferocytosis
120500357 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120500357 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmoa04131
]
120500357 (VPS18)
Membrane trafficking [BR:
pmoa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120500357 (VPS18)
Hops complex
120500357 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
zf-RING_5
zf-RING_11
zf-RING_UBOX
Lact-deh-memb
zf-ANAPC11
zf-RING_2
zf_RING_Vps8
Nup54_57_C
LETM1_C
STX17_N
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
120500357
NCBI-ProteinID:
XP_039561060
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDEYEDALHRSVSVPQSRASVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTSQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGLEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAVHADHLPSFREFPANLGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDERVWVYPPDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGILQGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHRACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKSHHRPKDADTISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggacgagtacgaggacgccctgcaccgctccgtgtccgtgccgcag
agccgcgccagcgtgggcatcccgcactccggatatgtcaatgcacgactagagaaggaa
acaccaatatttaacaagcagaggattgattttgcacctccagagaaaattaacagctta
gtggtctcctctaaccagctctgtatgagccttgggaaagacaccctgctcaggattgat
cttgggaagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtt
tacaagatgtttttggaccatacaggctctcatctcctgattgctctgaacaccagcgag
tgcctttacctgaacagaagcgttcagaaagtgcgggcactctcccgctggaaaggacac
ttgattgaaagcgtgggctggaacaaatttcttggttcagaaaccaacacagggcctatc
ctggtggggacatcccaggggcagatctatgaggctgaaatctctgtcagcgaaggaagc
ctcttcagcactaaccctgaccagtacttccgacaggtctacactctggaggaggaatct
ggacctgccccagtctgctgcttggaaattgaacgagggctagaagggaaattttttatt
atagccaccactaggaagagactctttcagtttgttggcaaagtgcctgaagggacggag
cagcaaggcttcagctccatatttgctgtgcatgctgaccatctgcccagctttcgggag
tttccagccaacttgggtttcagtgagatagccttttacactccaaaactgcgctccaac
ccacgctcctttgcctggatgatgggaaatggagttctgtatgggaccttggattatagt
cgtcctgattcaattctgagtgatgaaagggtctgggtttatcctcctgatattgacata
actgtgaacaagccaatatccattgtgcttacccagttccactttctgttgctgctgcct
gaccgggtgaaggctgtctgcactctgaatggacaagttgtttttcaggatctcttcctg
gagaagtttggcttgctgacacgcatgattaaagatcccacagtccagcagatatggatt
cacactgagaaagtagtgttccgctaccatgtccagcgggaatctagagatgtgtggaag
atgtatatgaatatgaacaaatttgatttagcaaaagagtattgtaaggaccgtccagag
tgtcttgacattgtgttggccaaagaggcagagcactgcttccaaaacaagaggtatctg
gacagtgccaaatgttatgcactgacccagaactactttgaggaaattgctctgaagttc
attgaagccaagcaagaagaggccctgatggagtttctgattaagaagctgagtaaccta
aagccttcggagaagacacagactactctgctgaccacatggttgacagagctgtatctg
aactggctgggcatattgcaaggagatccctcacagcgaaatctctatttagatacacgg
gagaagttccgcactttcctgagcagtcctaaaaacaaagactgtctttttaataatcgg
gcatctatttatgagctgttggcaagccatggcgacacagagcacatggtctactttgca
gtcattatgcaggattatgagcgtgtagtagctcaccactgccagcatgacgagtacgat
gaggctctaaatgtgctgtccaggcacagagatgagaaactcttctacaagttctctcca
gttctcatccaacatattcccaagaaggtcgttgatgcttggatttctatgggctctaga
ctggatgccaggaacctcattccagcccttgttaactacagccagagtgccagcacccag
cagatcaatgaagcaatcagatatatggagttctgtgtctaccagttggaggaaacccag
caagccattcacaactacctgttgtctctttatgctttgtgtcggccggactcactgctg
tcatacctggagcaagcaggaactaacccaaacaggatccactatgacctgaagtatgca
ctgcgcctgtgtgcagagcacgggcaccaccgtgcatgtgtccacatttacaaagtgatg
gaattatatgaggaggctgtggatctcgccttacaggtggatgttgatcttgccaagtcc
tgtgcagatcttcctgaagatgatgaggaactccggaagaagctgtggttgaagattgct
cgccatgttgttcaggaagagaaggatgtcaagaaggcaatggcctgcctctcgagctgt
gctctgctgaagattgaagatgtgctgccattctttccagactttgtcactattgaccat
ttcaaggaggcaatctgtaactccctggaggattacaacaagcacattgaggagctgaaa
agggagatggaggaagccactcagagtgccaagaggatccgagaggacatccaggaaatg
agaaataagtatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttcccctt
ctaaaccgccctttttaccttttcctgtgtggtcacatgtttcactatgactgtctcctc
caagcagttttccctaaccttcctgcttataagcaggcaaaacttgaagatcttcagaag
aagctggcagctaccagccagccatccaagagccaccatcgtcccaaggatgcagacacc
attagcctggggaaggggcagcagagccgggaacagatcaaagctgacattgatgatatt
gtggcagctgaatgtgtgtactgtggtgagctgatgatccggtccattgacaagcctttt
attgatccccagaagtatgaagaggagatgcaaagctggttgtaa
DBGET
integrated database retrieval system
