Passer montanus (Eurasian tree sparrow): 120500690
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Entry
120500690 CDS
T07277
Name
(RefSeq) protocadherin Fat 4-like
KO
K16669
protocadherin Fat 4
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmoa04515
]
120500690
Cell adhesion molecules [BR:
pmoa04515
]
Cadherins
Cadherin related
120500690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Laminin_G_2
Laminin_G_1
EGF
Cadherin_2
Fibulin_C
hEGF
EGF_CA
EGF_TEN
EGF_2
Cadherin_4
EGF_3
Motif
Other DBs
NCBI-GeneID:
120500690
NCBI-ProteinID:
XP_039561830
LinkDB
All DBs
Position
Unknown
AA seq
3238 aa
AA seq
DB search
MLDLTVEENIGDGSKILQLTAMDADEGANALVTYTIISGADDSFHIDPESGELIATKRLD
RERRSKYSLLVRADDGLQSSDVRINITVSDVNDHIPKFSKPVYSFDIPEDATPGSLVAAI
LATDDDSGVNGEITYTISEDDEEGIFFLNPVTGVFNLTRALDYEAQQYYILTVHAEDGGG
QSTAIRVYFNILDINDNPPVFGMASYSTSLMENLPPGSAILNFSVTDADDGPNSQLSFSI
ASGDSAGQFGIDNRGVLSIRQPLDRESQSFYSLVVQVHDMAPLPASRYTSTAQVSIILLD
VNDSPPSFISPKLTYVPENTPMDTVVFKAQATDPDSGPNSYIEYSLLRPPGSKFSIGTID
GEVRLTGELDREAVANYTLTVVATDKGQPSLSSSTDVVVIVLDINDNNPLFAQKLYKVEV
AENTLTGTDLIQVLAADGDEGTNGQVRYAIVSGDASNEFRIDSVTGVITVAKPLDREKKP
SYTLTVQSSDRGSSPRTDTATVSIVLKDVNDFIPTFELSPYSVNVPENLETLPKVVLQVV
ARDDDQGLNSELTYVLVAGNEEGAFTLSGSGELRLVRSLDREAKEQYLLLVTAADAGSPA
LTGTGTIAVTVDDVNDNVPTFAFNMYFATVPEDAPTGTDILLVNSSDADASTNAVISYRL
RGGNSQFTINPSTGQIITSALLDREARENYTLVVVASDGGFPRALSSSASVLVSVADVND
NPPKFQHHPYVTHVPSPTPSGSFVFAVTVTDADAGSNAELHYSLVGKNSEKFHIDPARGA
ILAAKPLAGESEVTISVHVRDGGRYPKTDSTTVTVRFVDKAEFPRVQAEQETFTFPENQA
VGTLVTTVSGSSARGGSLSYYIASGNLGSTFLVDQVTGQLSVGRALDFEAVQKYVVWIEA
RDTGFPPFSSYKKLEVSVIDVNDNVPEFEQDPFVAEIAENLSPRKILTVAAVDRDSGLNG
QLNYEIIEGNTENSFSINRATGEIRSVRPLDREKLSQYTLTIKASDKGTPLQSTTVKVII
NILDENDNAPRFSQIFSASVPENAPLGFTVTRVTTSDEDIGVNAVSRYSIRDTSLPFTIN
PSTGDITISRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFTKPSYYLEC
PELPGIGLKVTQVSATDPDEGSNGQVFYFIKSQSEFFRINATTGEIFNKQYLRYQNSSGS
SNVNINRHSFIVTSSDRGSPPLVSETTVTINVVDSNDNAPLFLAPKYFTPVTKNVRVGTN
LIKVTAVDDKDFGLNSEVEYFISDESKTNKFRLDRSTGWISVSSSLMADLNKNFLFKVKA
KDKGNPPLSSEVAVEIVVTEENYHTPEFSQSRMSVTIPESYSVGTVVRTVSARDRDAAMN
GLISYNISSGNEAGIFAINTTTGTLTLAKPLDFELHQKHELVVTATDGGWVSRTGYCSVT
VNVIDVNDNSPAFSPEEYFPTVLENAPSGTTVISLNATDADSGSNAVIAYAIQSSDSDLF
VIDPNTGTITTQGFLDYETKQSYHLTVKAFNVPDEERCSFATVNIQLEGTNEYVPRFVSK
LYYFEVSEAASKGTVVGEVFASDRDMGIDGEVHYLIFGNSRKKGFQVDEKSGQIYVSGPL
DREKEERISLKVLAKNLGSIRGADIDEVTVNITVLDANDPPVFTLGAYNVRISEGVPPGT
HVTFVSAFDSDSVPSWSRFSYFIGSGNENSAFSINPQTGQVTVTAELDRETLPVYNLSVL
AIDSGTPSATGSASLVVTLEDINDNGPTLSTSQGEVLENNRAGTLVMTLQSSDPDLPPNQ
GPFTYYLLSTGPATSYFSLSTAGVLTTTREIDREQISDFYLSVITRDSGVPQMSSTGTVQ
IKVIDQNDNPSQPRTVEIFVHYYGNLFPGGILGNVKPQDPDVLDSFQCSLTSGVTSLFSI
PGGTCELHSQARSTDGTFDLAVLSNDGLHGAVTSSVRIFFAGFSNATIDNSVLLRLSAHS
VRDFLTNHYLHFLRIASSQLTGLGTAIQLYGLYEDSNHTFLMAAVKRGSNQYVNPSGVAT
FFESIKDVLFRQSGVRVEAVDHDWCLQSPCQNGGSCLRRLAVGPALRTHESVPVIIVANE
PLRPFMCRCLPGYEGSLCETDVDECLPSPCHNEGTCHNLVGGFSCSCPEGFTGMACERDV
NECLSNPCKNGAACQNFPGSFNCVCKTGYTGKTCDSTVNYCECNPCFNGGSCQSGLEGYF
CHCPFGVFGNHCELNSYGFEELSYMEFPSMDPNNNYIYIKFATIKSNALLLYNYDNQTGE
RAEFLALEIAEGRLRFSYNLGAGTYKLTTAKKVSDGQFHTAIARRAGMAASLTVDSCSED
QEPGYCTVSNVAVSTDWTLDVQPNRVTVGGIRSIEPILQRRGQVESHDFVGCIMEFAVNG
RPLEPSQALAAQGILDQCPRLEGACTTSPCQHGGTCVDQWSWQQCHCKDGLTGRHCEKYV
TADTALSLEGKGRLDYHMSPNKKRDYLMRLGAWGPPGVERLEVKFMTRSESGILLHVQES
SNFTTVKIKGGKVHYISDAGVAGKVERNIPEVYAADGQWHSVLLEKNGSATILSVDRTHS
RDILHATQDFGGLNVLTISLGGIPSSQPFKSTAAGFNGCISYIKYGGESLPFSGKHSLAT
LSKTDPSVKMGCHGPDVCASNPCWGELMCINRWFAYQCVPPGACASSPCLNGGSCEPGPH
ATFTCSCPEAYAGRTCETVVACLGVLCAPGHECRAGVSGGHVCLPSPRPTELSLPLWAVP
AIVGSCATVLALLVLSLILCNQCRGKKSKGPKEEKKTKQKKKKKGSENVAFDDPDNIPPY
GDDMTVRKQPEGNPKPDIIERENPYLIYDETDIPHATETIPSAPLASPEPEIEHYDIDNA
SSIAPSDADIIQHYKQFRSHTPKFSIQRHSPLGFARQSPMPLGASSLTYQPAYGQGLRTT
SLSHSACPTPNPLSRHSPAPFSKSSTFYRHSPARELHLAIREGSPLEMHGDVCQPGIFNY
ATRLGRRSKSPQTMAGHSSRPGSRLKQPIGQIPLETSPPVGLSIEEVERLNTPRPRNPSI
CSADHGRSSSEEDCRRPLSRTRNPADGIPAPESSSDSDSHESFTCSEMEYDRDKPVAYTS
RMPKLSQVNESDADDEDNYGSRLKPRRYPGRRGEGGPVGAQAAGSAAGEGSLPGKLGQQA
GSFNWDNLLNWGPGFGHYVDVFKDLASLPEKAAAAASEDGKGGTAKPVSKEGEAEQYV
NT seq
9717 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacctgactgtagaggagaacataggggatggatctaaaatactgcagctgaca
gccatggatgctgatgagggagccaatgccctggtgacgtacaccatcatcagcggtgca
gatgacagcttccacatcgaccccgagtcgggcgagctgatcgccaccaagcgcctggac
cgcgagcgccgctccaagtactccctgctggtccgcgctgacgacggcctgcagtcctcg
gacgtgaggataaacatcaccgtcagcgatgtcaatgaccacatccccaagttctccaag
ccagtgtactcctttgacatcccagaagatgccactccaggctccttggtggcagccatt
cttgccactgacgacgactcgggcgtcaacggggagatcacgtacaccataagcgaggat
gatgaagagggaatcttcttcctgaatcccgtcaccggggtcttcaacctgacacgggcc
ctggactacgaagctcagcagtattacatcctcaccgtccatgccgaggatgggggaggc
cagtccacggccatcagggtgtacttcaacatcctggacatcaacgacaacccgcccgtc
tttggcatggcctcctacagcacttccttgatggagaaccttccccctgggtccgccatc
ctcaacttcagcgtcaccgacgccgatgacggtcccaactctcagctgtccttcagcatc
gcgtccggggacagcgcggggcagtttggcatcgacaaccgtggggtgctgagcatccgg
cagcccttggatcgggaaagccagtccttctacagcctcgtcgtgcaagtccacgacatg
gccccactgccagcctccaggtacaccagcacagcccaggtttccatcattctgctggat
gtgaacgacagccccccgagctttatctccccgaagctgacgtacgtgccggagaacacg
cccatggacacagtggtgttcaaagcccaggccacggatcccgacagcggtcccaacagc
tacatcgagtacagcctgctccggcctccgggaagcaagttcagcatcggcaccattgat
ggcgaggtgaggctcaccggggagctcgacagagaagccgtggccaactacaccttgact
gtggtagccacagacaagggtcagccgtccctttcttcgtctacggatgtggtggtcata
gtcctggacatcaatgacaacaacccgctctttgcccagaagctttacaaagtggaggtg
gcggaaaatactttgacagggacggatttaatccaggtgctggctgctgatggagatgag
gggacaaacgggcaggtgcgctacgccatcgtcagcggggatgccagcaatgagtttcgg
atcgattctgtgacgggggtgatcactgtggccaagcctttggacagagagaagaagccc
tcctacacactgactgttcagtcatccgaccgtgggagcagccccaggaccgataccgcg
acagtcagtattgtcctgaaggatgtcaatgatttcattcccacgtttgagctttccccc
tactctgtgaacgtccctgagaatttggagacactcccaaaagttgtccttcaggttgta
gcaagggatgatgaccaggggctgaacagtgagctgacctacgtgctggtggctggcaat
gaggagggagccttcaccctgtcgggcagcggggagctacgcctggtgcggagcctggac
cgcgaggccaaggagcagtacctgctgctggtcacggctgctgacgcaggatctcctgcc
ctcactggcactggaaccattgctgtcacagtggatgatgtcaatgacaacgtccccacg
tttgcctttaacatgtattttgccactgttccggaggatgctcccacggggacagacatt
ttgctcgtgaactcctcggatgctgatgcttctacaaatgctgttattagctacaggctt
aggggcggcaattcccaattcaccatcaacccctctacaggacagatcatcaccagtgcc
ctccttgaccgggaggcgagggagaactacaccctggtggtggtggccagcgacgggggc
ttccccagggctctctccagctctgccagcgtgctggtgtccgtggccgacgtgaacgac
aacccgcccaaattccagcaccacccctatgtcacccacgtgccgtcgcccaccccctca
ggctcattcgtgtttgctgtgactgtcaccgacgcagatgccggctccaatgccgagctc
cattattccctcgtggggaagaactctgagaaattccacattgatccagcaaggggggca
atcctggctgcaaaaccactggcaggagagtccgaagtcaccatttctgttcatgtgagg
gatggtggccggtatcccaagacagactctaccactgtcactgtgaggtttgtggacaaa
gccgaatttcctcgtgttcaggccgagcaggagaccttcaccttccctgaaaaccaagca
gttgggacacttgtcaccaccgtctctggatcttcagccagaggaggctccttgtcctat
tacattgccagcggtaacctgggcagcaccttcctggtggaccaggtgacaggacagctt
tctgtcgggcgggctttagattttgaagccgtgcagaaatacgtggtgtggattgaggcc
agagacacgggctttccccccttttcctcctacaagaaattggaagtatcagtgattgac
gtcaacgataatgtgccagagtttgagcaagatcccttcgttgcagaaatagcagagaac
ctgtccccacggaagatactgacggtggctgctgttgacagggacagtggtctgaatgga
cagctgaattacgaaataattgagggcaataccgaaaacagtttcagtatcaatcgagcc
actggtgagatcagaagtgtccggcccttggacagggagaaactgtctcagtacacgcta
accataaaagcttcagacaaaggcactccgctccagagcacgactgtcaaagttatcatt
aacattttagatgaaaatgacaacgctccgaggttttcgcagatattcagtgcttctgtg
cctgaaaatgctcctctgggttttacagtaacacgagtcacaacgtcagatgaggacatt
ggggtgaacgcagtcagcaggtactccataagggatacgagtctcccatttaccataaat
cccagcactggggacatcaccatcagcagaccactgaacagagaggacactgaccgctac
agaatcagggtctctgcacatgactcagggtggacggtgagcacagacgtcactatattt
gtcacagatgtcaatgacaatgccccacgatttacaaaaccatcctattacctggagtgt
cctgagcttcctgggatcgggctaaaggtcacccaggtttcagccactgatccagatgaa
gggtccaatggtcaagtcttctacttcataaaatcccagtctgagttcttccgcattaac
gcaaccacaggagagattttcaacaagcagtacttaaggtaccaaaactccagcggttcc
agcaatgtcaacatcaacaggcacagcttcatcgtgacatcatcagaccggggcagtccc
ccgttagtgagtgagaccaccgtcaccataaacgtcgtagacagcaatgacaacgcaccg
ctcttcctcgcccctaaatatttcactcctgtgactaagaacgtgagggttggcacaaat
ctgattaaagttactgcggtggatgacaaggactttggcttgaattctgaagtggagtac
ttcatctctgatgagagcaaaactaataaattcagactggacaggagtacaggctggatt
tctgtgtcatcttcactaatggctgatttgaacaaaaacttcctgtttaaagtgaaagcc
aaggacaagggtaatcccccactctcatctgaggtagctgttgaaatagtagtgacagaa
gaaaattaccatacacccgagttttcccagagccgcatgagcgttactatcccggagagc
tactctgttggaacggtggtcaggacggtttcagcacgagacagagatgctgctatgaac
ggattaatcagctacaatatttcctctggaaatgaagctggaatctttgctattaatacc
accactggtacactgacactagccaaaccacttgattttgagttacaccaaaagcacgag
ctggttgttactgccacggatggagggtgggtgtcccgaacaggctactgcagtgtcact
gtcaatgtcattgatgtcaatgataactccccagcattcagccctgaggagtactttccc
accgtgctagaaaatgcccccagcgggacaactgttattagtttaaacgccactgatgct
gactctggatctaacgctgtgattgcgtatgccatccagtcctcagacagtgacctcttt
gtcattgaccccaacacaggaaccatcaccacccagggatttttagactatgaaacaaag
cagagttaccatctaacagtaaaagcttttaatgttccagatgaagagaggtgcagcttt
gctactgtcaacatccagttagaagggacaaatgaatatgtgccccgttttgtgtccaag
ctttattactttgaggtttcagaggcagcctccaaaggtactgttgtaggtgaggttttt
gcaagtgatcgtgatatgggcattgatggagaagtccactacctcatctttggcaacagc
agaaagaagggcttccaggtagatgagaaaagtggccagatctacgtttcaggacctctt
gacagagaaaaagaagaacggatctctttgaaagtccttgcaaaaaatttggggagcatt
cgtggcgcagatatagatgaagtaactgttaatatcacagtcctggatgccaacgatcct
cccgtttttaccttgggagcctacaatgtacggatcagcgagggtgttcctccaggcacc
catgtcaccttcgtcagtgcctttgattcagattctgtccccagctggagcaggttttcc
tatttcatcgggtctggcaacgagaacagcgccttttccatcaacccacagacgggacag
gtgacggtcactgcagagctggatcgagaaacgctgcctgtctacaacctctctgtgctg
gccatcgattcaggaacgccgtctgcgacaggaagtgcctctctagtggtaactttggaa
gacatcaacgacaacggccctaccttgtccaccagccaaggagaagtcctggagaataac
cgcgcaggaactctggtgatgacacttcagtcatcggatcccgatctccctcccaaccaa
ggtcctttcacgtattacttgctcagcactggccctgccaccagctacttcagcctcagc
accgctggagtcctgacaacgacgagggagattgacagggagcaaatcagcgatttctac
ctctcagtgattaccagagactctggcgttcctcagatgtcttccacaggaactgtgcag
atcaaggtaatagaccaaaacgacaacccgtctcagcccagaacagtagaaatctttgtt
cattattatggcaacctcttcccaggtggaattttgggcaacgtaaagccgcaggatcca
gatgtgctagacagcttccagtgctccctcacctcaggagtcaccagccttttcagcatt
cccgggggcacctgtgagctgcactcgcaggcgaggtccacggatggcacgtttgacctg
gccgtcctcagcaatgacgggctgcacggagctgtcaccagcagcgtccggatcttcttc
gcgggcttcagcaacgccaccatcgacaacagcgtcctgcttcgcctgagcgcccacagc
gtgcgggacttcctgaccaaccactacctgcacttcctgcgcatcgccagctcccagctg
acggggctgggcacggccatccagctctacggcctctatgaggacagcaaccacaccttc
ctgatggcggccgtcaagcgcggcagcaaccagtacgtgaaccccagcggcgtggcaacc
ttcttcgagagcatcaaggatgtcctcttccgtcagagcggggtgcgggtcgaggccgtg
gaccacgactggtgcctgcagagcccctgccagaacggagggagctgcctgaggaggctg
gcggtggggcccgccctgaggacccacgagagcgtgcccgtcatcatcgtggccaacgag
ccgctgcggcccttcatgtgcaggtgcctgccggggtacgagggcagcctgtgcgagacc
gacgtcgacgagtgcctcccgtcgccctgccacaacgagggcacctgccacaacctggtg
gggggcttctcctgcagctgccctgagggtttcaccggcatggcttgcgagagggacgtc
aacgagtgcctttccaacccctgcaaaaatggtgctgcctgccagaacttcccaggaagc
ttcaactgcgtttgtaaaaccgggtacacagggaaaacgtgtgactccactgtcaactac
tgtgagtgcaacccttgtttcaatggtggttcctgccaaagtgggctggaggggtatttc
tgccactgtccctttggtgtttttgggaatcactgcgagctgaacagttacggatttgaa
gagctgtcctacatggagttccccagtatggatcccaacaataattacatctacataaag
tttgccaccataaagagtaacgccttgctgctgtacaactacgacaaccagactggggag
cgggcggaattcctggcgctggagatagcggaagggaggctgaggttctcctacaacctg
ggcgctggcacgtacaagctcaccacggctaagaaggtgtctgatggacagttccacacc
gccatcgcccgccgggctggcatggcagcatccctgacggtggattcctgctctgaggac
caggagccaggctactgcactgttagcaacgttgctgtttcgactgactggactctcgat
gtacagccaaatcgagttactgttggtggcatcaggtccatagagcccatccttcagagg
agaggacaggtggaaagccatgattttgtgggctgcataatggagtttgcagtcaatgga
cgtcccctggagcccagccaggctttggcagcccaaggaatcttagatcagtgtcccaga
ctggaaggtgcttgcacgaccagcccctgccagcacggtggcacttgtgtcgatcagtgg
tcgtggcaacagtgtcactgcaaggatggactgacaggaaggcactgtgaaaaatatgtc
actgctgacacggccctgtcgctggagggcaagggacgcctcgactaccacatgagcccc
aacaagaagcgggactacctgatgagactgggggcttggggcccgccgggcgtggagcgc
ttggaggtgaagttcatgacgaggagcgagagcggcattctgctccacgtccaagagagc
agcaacttcactaccgtgaagataaaaggtgggaaggtgcactacatatctgatgctgga
gttgctgggaaagtggaaaggaacatccctgaggtgtatgctgcagatggccagtggcac
tcggtcctcctggagaagaacggctctgccaccatcctgtcagtggacaggactcacagc
cgggacattctccatgccacccaagacttcggtggcctgaacgtcctcaccatttctctg
ggaggaattccatccagccaacctttcaagagcacagctgcaggcttcaacggctgcatt
tcctacatcaagtacggcggggagagcctccccttctccggcaagcacagccttgccacg
ctctccaaaacagacccctcggtgaagatgggctgccacggccccgacgtgtgcgccagc
aatccctgctggggcgagctgatgtgcatcaaccgctggttcgcctaccagtgcgtgccc
ccgggcgcctgtgcctccagcccctgcctcaacgggggcagctgcgagcccgggccccac
gccaccttcacctgcagctgccccgaggcctacgcgggacggacatgcgagaccgtggtg
gcctgcctgggggtcctgtgtgcccccggccatgagtgcagggcgggcgtcagcggcggc
cacgtgtgcctcccgtcccctcgccccaccgagctgtccctgccgctctgggccgtgccg
gccatcgtgggcagctgcgccacggtcctggcgctgctggtcctcagcctcatcctctgc
aaccagtgccgggggaagaagtcaaaggggccgaaagaggagaagaaaacgaagcagaag
aagaagaagaaagggagcgagaatgtggcgtttgatgaccctgacaacatcccaccctac
ggtgatgacatgactgtcaggaagcagcccgaagggaacccgaaacccgacatcatcgaa
agggaaaacccttacctcatctacgatgagacagacatcccgcatgccacggagacaatc
cccagtgccccgctggcttcccccgagcctgagatagagcactacgacatcgacaatgcc
agcagcatcgccccctcggacgctgacatcatccagcactacaagcagttccggagccac
actcccaagttctccatccagaggcacagcccgctgggcttcgcccggcagtcccccatg
cccctgggagccagcagcctgacctaccagcctgcctacggacagggcttgaggacaacg
tccctgagccactcggcgtgccccactcccaaccccctgtctcggcacagccccgcaccc
ttctccaaatcctcgacgttctacaggcacagcccagccagggagctgcacctcgccatc
agggaagggagcccgctggagatgcatggcgatgtctgccagcccggcatcttcaactac
gccacgcggctggggaggagaagcaagagcccacagaccatggcgggccacagctcccgc
ccgggaagccgcctgaagcagcccatcgggcagatcccgctggagacatctcccccggtg
gggctctccatcgaagaggtggagagactgaacacccctcgccccaggaaccccagcatc
tgcagcgcagaccacggccgctcctcttccgaggaggactgcaggaggcctctgtcccgg
acgaggaacccggccgacggcattcccgcgcccgagtcctcctccgacagcgactcgcac
gagtccttcacctgctccgagatggagtacgaccgggataaacccgtggcctacacctcc
aggatgcccaagttgtcccaggtcaacgagtcggatgcggatgatgaggacaactacggc
tcgaggctgaagccgcggcggtacccggggcgccgcggcgagggcgggcccgtgggggca
caggcagcaggcagcgcggccggggagggctccctgcccgggaagctgggccagcaagcg
ggaagcttcaactgggacaacctcttgaactggggcccgggctttgggcattatgtggat
gttttcaaagatttggcatcgcttcctgagaaagcagcagcagcagcgagtgaagacggc
aaaggtggtacagccaagcctgtttccaaggagggggaagcagaacagtatgtatag
DBGET
integrated database retrieval system