Passer montanus (Eurasian tree sparrow): 120500933
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Entry
120500933 CDS
T07277
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04136
Autophagy - other
pmoa04140
Autophagy - animal
pmoa04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120500933 (ATG16L1)
04136 Autophagy - other
120500933 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120500933 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmoa04131
]
120500933 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
pmoa03029
]
120500933 (ATG16L1)
Membrane trafficking [BR:
pmoa04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
120500933 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
120500933 (ATG16L1)
Mitochondrial biogenesis [BR:
pmoa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120500933 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
NBCH_WD40
eIF2A
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_NWD2_C
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_SPT8
INO80F
HTH_6
WD40_like
Lipoprotein_6
PALB2_WD40
HEF_HK
WH_CYT4
Fez1
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
120500933
NCBI-ProteinID:
XP_039562385
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MAAGLRAAGFPPWKRHIAEELRRRDRLQRQAFEEIIAQYNKLLEKSDLHAVLADKLQAEK
YDMQSRHEISPGHDSAWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DKEMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKL
RKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPRDDD
IEVLADETSDTAEETSPVRAVSRTSSKRLSQPAGGLLDSISNIFGLSESPLLGHQSSDTA
RRRSLSSFPAPQDNAEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMD
RRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHT
LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
SGHFDKKIRFWDIRTESIVKELELLGRITALDLNPERTELLTCSRDDLLKIIDLRVGAVK
QTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYIWNVLTGKLERTLAKHHSSSINAV
TWSPAGAHVVSVDKGNKAVLWAEF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggctgcgcgctgccgggttccccccctggaagcggcacatcgcggaggag
ctgcggcggcgggaccggctgcagcgccaggctttcgaggagatcatcgcccagtataac
aagctgctggagaagtcagacctccatgcagtgctggctgataaacttcaagcagaaaaa
tatgacatgcagagcagacatgagatcagcccaggacatgatagcgcatggaacgacgct
cagctgcaggagctggcccagctgaagataaagcaccaagaggagctgactgagctgcac
aagaaacgtggcgagctggcccagtctgtaattgatttgaacaaccaaatgcagcagaag
gacaaagagatgcagatgaatgaagccaagattgcagagtatttgcaaaagatttctgaa
ctggaaacagagtgccaggaattgcgtagcaaactgcaagatcttgagcgagctaatcag
acactgaaagatgaatatgatgctctccagatcaccttcaatgccctggaggagaaacta
aggaaaactactgaggacaaccaggagctggtctcacgttggatggcagagaaagcacaa
gaagccaatcgcttgaatgcagaaaatgaaaaggattcaaggagacgccaggccaggctg
cagaaggagctggcagaagctgccaaagaacccttgcctgttgaacccagggatgatgat
atcgaagtgcttgcggatgaaacctctgacacagctgaggaaacctctccagtgcgagct
gtcagcaggacgtccagtaagcgactctcccagccagctggaggccttctggactctatc
agtaatatctttggtctgtctgagtctccccttttgggacatcagtcttctgatactgcc
aggaggcgttctctgtcctcattccctgcaccccaggataatgcagagccacatccaggt
gccagtaaagaagtgagagtgcccactactgccatttgtgtctttgatgcacatgatggg
gaggtgaacgcggtgcagttcagccctggctcccggttactggcgacaggaggcatggac
cggagggttaaactctgggaagtcttgggagacaggtgtgagcccaaaggttccctctct
ggcagtaacgctgggattacaagcatagaatttgatagtgctggctcttacctcttagca
gcctcaaatgactttgccagcagaatctggacagttgatgacaatcgattacggcacacc
cttacaggtcacagtggtaaagttctgtcagccaagttcttgctggacaatgcgcgcatt
gtttcgggaagtcatgaccggaccctcaagctctgggacctccgcagcaaagtttgtata
aaaacagtgtttgcaggatctagctgcaacgacatcgtgtgtactgagcagtgtgtaatg
agtggacattttgataagaaaattcgtttctgggacatcaggactgaaagcatagtaaaa
gaactggagttgcttgggagaatcacagctctggacctgaacccggagcgcacagagctt
ctgacctgttcccgtgatgatctgctcaagatcattgacctgcgggtcggtgctgtcaag
cagacgttcagtgcccagggattcaagtgtggctctgactggacgagagttgtgttcagc
cctgatggtaactatgtggctgctggctcagctgatggggccctctacatttggaatgtg
cttactgggaaattggagaggacgcttgcaaagcatcacagttcttctatcaatgcagtc
acgtggtctccagcgggtgcccacgtggtcagtgtggacaaaggaaacaaggctgtgctg
tgggctgagttttga
DBGET
integrated database retrieval system
