Passer montanus (Eurasian tree sparrow): 120500997 Help Entry 120500997         CDS       T07277                                  Symbol IGHMBP2 Name (RefSeq) DNA-binding protein SMUBP-2   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism pmoa  Passer montanus (Eurasian tree sparrow) Brite KEGG Orthology (KO) [BR:pmoa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:pmoa03009]     120500997 (IGHMBP2)    03012 Translation factors [BR:pmoa03012]     120500997 (IGHMBP2) Enzymes [BR:pmoa01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      120500997 (IGHMBP2)     5.6.2.5  RNA 5'-3' helicase      120500997 (IGHMBP2) Ribosome biogenesis [BR:pmoa03009]  Eukaryotic type   Other ribosome biogenesis factors    120500997 (IGHMBP2) Translation factors [BR:pmoa03012]  Eukaryotic type   Initiation factors    Initiation associated factors     120500997 (IGHMBP2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_30 AAA_19 zf-AN1 Viral_helicase1 Helicase_RecD ResIII AAA_16 nSTAND3 AAA_22 DEAD UvrD-helicase Flavi_DEAD AAA_25 SLFN-g3_helicase IstB_IS21 ABC_tran T2SSE AAA DAP3 PhoH NTPase_1 Glyco_transf_21 UvrD_C_2 Motif Other DBs NCBI-GeneID:  120500997 NCBI-ProteinID:  XP_039562537 LinkDB All DBs Position Unknown AA seq 976 aa AA seqDB search MAAEAVERHLGLLRDEREAELAQSRAWQESVSLKELQRRGVCLLKLQVSSQRTGLYGRLL VTFQPRKRDSDTELPSNSFGPGDIVGLYESAGQGDPLCTGVVTRVTPKAVTVALEEPRDG ELAVDHERSFRLLKLANDVTYNRLKRALTALKQYRGGPASDLIDVLFFASAPRAFPETKP LEFFSSSLDESQKEAVSFSLAQRELAIIHGPPGTGKTTTLVEIILQAVQQGLKVLCCAPS NVAVDNLVERLAGGRARLLRLGHPARLLQPIQQHSLDAVLARGDNAQVVADIRRDIDHAW AKTKKAQDKGERSHFLGEIKTLRKELKEREEAAMAAALSQASVVLATNTGASSDGPLKLL PETHFDLVVIDECAQALEASCWIPLLKAPKCILAGDHKQLPPTIISHRAAAEGLSLSLME RLAGHYGERAVRMLTVQYRMHRLIMEWASSELYGGRLSAHPSVAQHLLRDLPGVSDTEET SIPLLLIDTAGCGLFELEVEDEQSKGNPGEVQLVGMHVQALVDAGVKAKDIAVVAPYNLQ VDMLRQHLCHSHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEERRINVAVTRA RRQVAVVCDSHTVGSRPFLRRLLDHLSQHGLVRSAFEYLDDLVPQNYPGEGRAQPQQGPK PPGPKARPAPAGKLKDAAAGAGSQKPGARSSPSAATAGRDGSGSKEGGDRFRAMLVAFLA SSEAQLDFPTSLNSHERMLVHVLAEEYGLQHLSSGEGRDRYISVRKRLPKQPPLPPEPLP EPLPKPLPEPQHPHGNTPDPAEPGESSKGLGKVDLKSLHLERVQREKARREEAARKVQEP KSGRRKKDKSEAKGKPAVGSAAGEDFDALISAAMEADRTCGFPRCKASVTTLGQLCHHCQ RLFCLSHHIPEVHGCGEKAKAQARQRISREGILYPGSGSKDKSLDPARRAHLQRRLDQKL SELTSQRKGKKKDKEK NT seq 2931 nt NT seq  +upstreamnt  +downstreamnt atggcggccgaggcggtggagcggcacctggggctgctgcgggacgagcgggaggccgag ctggcccagagcagggcatggcaggagagcgtctccctgaaggaattgcagcgcagaggt gtctgcttgctcaagctccaggtcagcagccagagaaccggcctctacgggcgtctgctc gtgacattccagcccaggaagcgggactcggacaccgagctgccctccaacagctttggg cccggggacatcgtggggctctacgagtcggcgggacagggggacccgctgtgcacgggc gtggtgacacgtgtcacccccaaggcagtgacagtggccctggaggagccccgggatggg gagctggccgtggaccacgagcgctccttccgcctgctcaagctggccaacgatgtcacc tacaacaggctcaaaagagctctgactgcactcaagcagtaccggggtggcccagcctcc gacctgatcgacgtcctcttctttgcctctgctcccagggcattccctgaaacaaagcct ctggagttcttcagttcctccctggatgagtcccagaaggaagctgtgtccttctccctg gctcagagggagctggccatcatccacgggcctccgggcactgggaaaaccacgaccctg gtggagatcatcctgcaggctgtgcagcagggcctgaaggtgctgtgctgtgccccgtcc aacgtggccgtggataacctggtggagcggctggcgggcggcagggcgcggctgctgcgg ctgggccaccccgcccgcctgctccagcccatccagcagcactccctggacgccgtgctg gcccgcggggacaacgcccaggtggtggctgacatcaggagggacatcgaccacgcctgg gccaaaaccaaaaaggcccaagacaagggagagcgcagccattttctgggtgagatcaag accctgaggaaggagctgaaggagagagaagaggctgccatggctgcagccctcagccag gccagcgttgtccttgccaccaacacaggtgcttcctcggacggccccctgaagctgctg cctgaaacccactttgacctggtggtgattgatgagtgtgcccaggctctggaagccagc tgctggatccctctgctgaaggctcccaagtgcatcctggctggggatcacaagcagctg ccccccaccatcatctcccacagggcggcggccgaggggctgtccctgagcctgatggag cggctggcggggcactacggggagcgggcggtgcggatgctgaccgtgcagtaccgcatg caccggctcatcatggagtgggcgtcctcggagctctacggcggccggctcagcgcgcac ccctccgtggcacagcacctgctcagggacctgccaggtgtctctgacacagaagagacc agcatccccttgttgctcatcgacaccgctggctgtggcctgtttgagctggaagtggag gatgaacagtccaaggggaatccaggggaggtccagctggtggggatgcacgtccaggcc ttggtggatgctggtgtgaaggccaaggacattgctgtggtggccccctacaacctccag gtggacatgctccgacagcacctctgccacagccaccccgagctggaaattaaatcagtg gatggtttccagggaagggagaaggaggcagtgatcctgtcctttgtcagatccaacagg aaaggtgaggtgggcttcctggccgaggagcggcggatcaacgtggcggtgacgcgggcg cggcgccaggtggccgtggtgtgtgacagccacaccgtgggcagccgccccttcctgcgg cgcctgctggaccacctgtcccagcacggcctcgtgcgctccgccttcgagtacctggat gacctcgtgccccaaaactaccccggggagggcagggcacagccccagcagggccccaaa ccaccgggccccaaagcgcggccggctccggctgggaagctcaaggatgcagcagctgga gcagggagccagaaaccgggagcacggagctccccgagtgctgccacagctgggagggat ggctcagggtcaaaggagggtggggacaggttcagggccatgctggtggccttcctggcg agcagcgaggcgcagctggatttcccaacatccctgaattcccacgagcggatgctggtc cacgtgctggcagaggagtacgggctgcagcacctgagctccggggagggccgggacagg tacatcagcgtccgcaagagactccccaagcagcccccactgccccccgagcccctccct gagccccttcccaagccccttcccgagccccagcatccccacgggaacacccctgaccct gcggagccgggggaaagcagcaagggcttggggaaagtggacctgaaatccctgcacctg gagagagtccagagggagaaagccaggcgggaggaggcggccaggaaggtgcaggagccc aagagtggcagaaggaaaaaggacaagagtgaagccaaaggaaaaccagcggtcgggagt gcggccggagaggatttcgacgctctgatctccgctgccatggaagctgacaggacctgt ggcttcccccgctgcaaggcctctgtcaccaccctgggccagctctgccaccactgccag cggctcttctgcctcagccaccacatccccgaggtccatggctgtggggagaaggccaag gcgcaggctcggcagcggatcagccgggaggggatcctgtaccccgggagcggctccaag gacaaatccctggatcccgccaggcgagcccacctccagcggcgcctggaccagaagctc agtgagctgacgagccagaggaagggcaaaaagaaagacaaggagaaatga

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