Passer montanus (Eurasian tree sparrow): 120501090
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Entry
120501090 CDS
T07277
Symbol
ARID1B
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120501090 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmoa03000
]
120501090 (ARID1B)
03021 Transcription machinery [BR:
pmoa03021
]
120501090 (ARID1B)
03036 Chromosome and associated proteins [BR:
pmoa03036
]
120501090 (ARID1B)
Transcription factors [BR:
pmoa03000
]
Eukaryotic type
Helix-turn-helix
ARID
120501090 (ARID1B)
Transcription machinery [BR:
pmoa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120501090 (ARID1B)
Chromosome and associated proteins [BR:
pmoa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120501090 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
120501090
NCBI-ProteinID:
XP_039562719
LinkDB
All DBs
Position
Unknown
AA seq
2361 aa
AA seq
DB search
MIMAAQVAAAPASANNSKGKAASLPGGLGPERGPGGAGAPGPGPALGVGEGSPAGGNSVN
NLDHHLHHHHRSEPPNMANNAAPAAAAGNNNNNASGGGGGSSSEPALKEGGSSSELSSSS
SSSSSSSSSSSNPGSAMETGLLPNHKLKSVGGDHPAAPPHHHHAHHPHHHAHHHHAHHPH
HHHHALQQQLNQFPPPPPQQPPPQHHPVQNNNSSLGGGGGGSGSNNNGGGGGGAAQPSAD
MEQQQHGGKDSVLGAQAEPPQQPQQMLNKGADEEEMPGKMGEPIGGRYDHPGLGPLGGQQ
QPQQPPPSAGSGGGGLGGGGGSGGGGGGPSAVGVSEFNSYYGNPAPAPASSATASRAGPC
FDQHGGQQSPGMGIMHPTAAPNSMDPLQNSHEGYPNSQYNHYPGYGRGPSGGGAGGGGGX
GGGGYGGSAAGYGVLSSPRQPGGGMMMGPGGGAGLGKAGAGAAAAAGGFARFSGQNQHPS
GATPTLNQLLTSPSPMMRSYGSSYPDYSSPSAPPQPQPQAAAAAPGSQQAAAGMGMGKDM
GAQYGAANPAWAAAQQRNHPAMSPGNTGQAISRTQGSPMDPMVMKRPQLYGMGNNPHSQA
QQSSPYPGQSYGPPGPQRYPVGMQGRAPAAMGGMQYPQQQIPPQYGQQGVSGYCQQGQQP
YYNQQPQPQHLPPQAQYLSQAQQRYQAQQDMSQEGYGTRSQPPMAPGKPNHEDLNLIQQE
RPSSLPVEVLASEDATFGHKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNPAQSP
FSPHASPHLSGIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHP
ALSQSPMPQDRGFMAGIQRNPQMSQYGPQQTGPSMSPHPSPGGQVHPGIGGFQQSNSSGT
YGPQMSQYGPQGNYSRPPTYSGVPNTSYSGPGPGMGINANSQMHGQGPSQPCGSMPLGRM
PSAGMQSRPFPGNMSSMTPNSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQS
RQGNFPAMNQSGIMGSSSPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSTAPMGLADMMTP
GESKLPLPLKADGKEEGAPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFH
GDESDSISSPGWPKTPSSPKSSSSTTTGEKITKIYELGNEPERKMWVDRYLTFMEERGTP
VASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSSAASSLKKQYI
QYLFAFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSNSMTEV
PGDLKPPTPASTPHGQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTPNAPYQQGINM
PDMMGRMPYEPNKDPFGGMRKVPGSNEPFMTPGQMPNSGIQDMYNQSPSGAMSNMSMSQR
QQFSYGSGYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHMDGMYGPPAKR
HEGDMYNMQYGNQQQEMYNQYGNAYTGPDRRPMQGQYPYPYNRERMQGPGQMQQHGIPPQ
MIGGPMQSSSSSEGPQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQR
INHESQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSPASFQRSLE
NRMSPSKSPFLPSMKMQKVIPTVPVSQVTGPPPQPPPIRREITFPPGSVEASQPVLKPRR
KITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLV
EYFRKCLIDIFGILMEYEVGDPGHKALDHKAAKKDDSQSLAEDTGKDENDECIDYFDEDE
EEGEDEKVEGEEKSIVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLFVVDRSDKLGR
VQEFDSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPSKKKDLEGKGESEEQ
QEKSITATIDDVLSARPGALPEDSNSGSQTETSKFPFGIHQAKSHRNIKLLEDEPRSRDE
TPLCTITHWQDSLAKRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKLILLHHEHPER
KRAPQTYEKEEEEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPI
LDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQ
EKLYATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVT
MAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISIS
AVLNSLVASVICDVLFQIGQL
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggccgcgcaagtcgcagcggctccggcgagtgcgaacaacagcaagggcaaa
gccgcgagcctgccgggcggcctgggcccagagcgaggcccggggggggccggggctccc
gggccgggccccgcactgggggtcggcgaggggagtccggccggcggcaacagcgtgaat
aatttagatcaccatctccaccaccaccaccgcagcgagccgccgaacatggccaataac
gcggctcccgccgctgccgccggtaacaacaacaacaacgccagcggcggcggcggcggc
tcctcctcggagccggctctgaaggaaggtggaagctcctcggagttatcttcatcttct
tcgtcttcttcctcctcctcctcctcctcctccaacccgggctcggctatggagacgggg
ctgctccccaaccacaagctgaagagcgtcggaggcgatcaccccgccgcgccgccccac
caccaccatgcccaccacccgcatcaccatgcccaccaccaccatgcccaccacccgcac
caccaccatcatgcactacagcagcagctaaatcaattcccgccgccgccgccgcagcag
ccgccgcctcagcaccatcccgtgcagaataacaacagcagcctcggcggcggcggcggc
ggcagcggcagcaacaacaacggcggtggcggtggcggcgctgctcagcccagtgcagac
atggagcagcagcaacatggaggaaaagacagtgttttgggcgctcaggccgagcccccc
cagcagccgcagcaaatgctgaataaaggcgccgacgaggaggagatgcccggcaagatg
ggcgagcccatcggcggccgctacgaccaccccggcttgggacccctgggcggacagcag
cagccccagcagccgcccccgagcgctgggagcggcggcggcggcctcggcggcggcggc
gggagcgggggaggcggcggcggcccctccgcggtgggtgtctcggagttcaatagctat
tatggcaaccctgcccctgcccctgccagcagcgctacggcgagccgcgccgggccttgc
tttgatcaacatggcggacaacaaagccccgggatggggataatgcaccccacggcggcc
cccaacagcatggaccccctgcagaactcccacgaagggtaccccaacagccagtacaac
cactacccgggctacggccgcggccccagcggcggcggcgcgggcggcggcggcgggnca
ggcggcggcggctacgggggctccgcggcgggctacggggtgctgagctccccgaggcag
cccggcggcggcatgatgatgggccccggcggcggagccggcctcggcaaggctggtgcc
ggcgcggcggcggcggccggcggctttgcgcggttctccgggcagaaccagcacccgtcc
ggggccacccctaccttgaaccagctgctcacgtcccccagccccatgatgcggagctac
ggcagcagctaccccgactacagcagccccagcgccccgccgcagccccagccccaggca
gcggcggccgccccgggaagccagcaggcagcggcgggcatgggcatgggcaaggacatg
ggcgcccagtacggagcggcgaacccggcctgggcagcggctcaacaaaggaaccacccg
gcgatgagccccgggaacaccgggcaggccatcagcaggacccagggcagtccgatggat
ccgatggtgatgaagaggccgcagctgtacggcatgggcaataaccctcactctcaggca
cagcagagcagcccctaccccgggcagtcctacggccctcccggcccccagcgctatccc
gtgggaatgcagggccgagccccggcagccatgggaggaatgcagtatccacagcaacag
atcccacctcagtatggtcagcaaggtgtgagtggctactgccagcagggccagcagccg
tactacaaccagcagccgcagccgcagcacctgccgccccaggctcagtacctgtcgcag
gcacagcagaggtaccaggctcagcaggacatgtctcaggaaggctatggaaccagatct
caaccccctatggccccaggaaagcctaaccatgaagacttgaatctaatccagcaagaa
agaccatcgagcttaccagttgaagtcttggcctccgaggatgctacatttggacacaag
gatttatctggatccattgacgacttgccgactggaactgaagcaaccctcagctcagct
gttagcgcgtcaggctctacgagcagccagggggagcagagcaaccctgcacagtctccg
ttttcccctcatgcttctccacatctctctggcatccctgggggcccgtcgccttcccct
gtgggctcacccgttggaagcaaccagtcaagatctggtcccatttctccagcgagtatt
ccaggcagtcagatgccaccgcagcctcctggcagccagtcagaatccagctcccaccct
gccttgagccagtcaccaatgccacaggaccgaggttttatggcaggaatacagaggaac
ccccaaatgtcacagtatggacctcaacaaactggaccttccatgtcaccgcacccctca
cctggaggtcaagtgcatcctggaattggtggctttcagcagagtaattcaagtggtact
tatgggcctcagatgagccagtatggaccacaaggaaactactccagaccaccgacgtac
agcggtgtccccaacacaagttacagcggcccagggcccggcatgggtataaatgccaac
agtcagatgcatggacaggggccaagccagccttgtggttccatgcccctgggacggatg
ccatcagctgggatgcagagcagaccatttcctggaaacatgagcagtatgacccccaat
tctcctggcatgtctcaacagggaggccctgggatgggcccacccatgccaactgtgaac
cgtaaggcacaggaggcggctgctgcagtgatgcaggctgctgccaactccgctcagagc
aggcaaggcaattttcctgccatgaatcagagtgggattatgggatccagctccccctac
actcagccgatgaacaacagctctggcctgatgaacccgcaggctcctccttacagcatg
gcccccaacatggtgaacagctcaacagcacctatgggtcttgcagatatgatgacacct
ggtgagtccaaacttccccttcctctcaaagcagatggcaaagaagaaggagccccccag
cccgagagcaagtcaaaggatagctacagctctcagggtatttctcagcccccaacccca
ggcaacctgccagtcccttccccaatgtccccaagctctgctagcatctcctcatttcat
ggagatgaaagtgatagcattagcagcccaggctggccaaagactccatcaagccctaaa
tcaagctcctctaccacaactggagagaagatcactaaaatctatgagctaggaaatgag
ccagagcgcaagatgtgggtggatcggtacctgacgttcatggaggagaggggcacgcct
gtggccagtctgccagctgtgggcaagaagcccttggacctgttcaggctctatgtctgc
gtcaaggagattggaggtttagcacaggttaataaaaacaagaagtggcgtgagctggca
accaccttgaacgttggcacttcgagcagcgcagccagctccctgaaaaaacaatacatt
cagtacctgtttgccttcgagtgcaagattgagcgaggggaggagccccctccagaagtc
ttcagcactggagataccaagaaacaacctaagattcagccgccatctcctgctaattct
ggttccttgcaaggcccacagactccacagtccactggtagtaattccatgacagaagtg
ccaggcgatttgaagcccccaacaccagcatccacacctcatggacagatgacacctatg
cagggtggcaggaacagcgccgtcagtgtgcatgatcccttttctgatgtgagtgattca
gcgttcccaaagcgaaactccatgacgccaaatgcaccataccagcagggaataaacatg
ccagatatgatgggaaggatgccatacgagccgaataaagatcctttcggtggaatgaga
aaagtgcctggaagcaatgagcctttcatgacccctggacaaatgcctaacagtggaata
caagatatgtataaccagagtccatctggagcaatgtccaacatgagcatgagccagcga
cagcagttctcttatggaagtggctatgacaggaggcatgaaccatatgggcagcagtat
ccaggacaaggacctccctcaggacagccaccatatggaggacatcaacctggaatgtat
ccacagcagcagaactacaagagacacatggatggcatgtatgggcctccagccaagcgc
catgaaggggatatgtataacatgcagtatggcaaccagcagcaggagatgtacaaccag
tacggcaacgcttacacagggcctgacaggaggcccatgcagggacagtacccgtatcca
tataacagggaaaggatgcagggcccaggacaaatgcagcagcatggaatacctccccag
atgattggtggccccatgcagtcatcatcctccagtgaaggccctcagcagaacatgtgg
ccaacacgaaatgatatgccttacccttaccagaacaggcaaggtccaggaggccccgca
caggcccctccgtatccagggatgaatcgcactgatgatatgatggtacctgaccagagg
ataaaccacgagagtcagtggccttctcatgtcaaccaacggcagccttcttatatgtca
tcctcagcctccatgcagcctatcactagacctcctcagtcatcctaccagacaccaccc
tctatgccaaaccacatctccagagctccaagtccagcatctttccagcgctctttggaa
aaccgtatgtctccaagcaagtctcctttcctaccctccatgaagatgcaaaaggttata
cccacagttccagtgtcacaggtcacaggacctccaccccaaccaccaccgattaggcga
gagattaccttccccccaggctctgtagaagcctcccaaccagtcttaaaaccaagacga
aagattacctcaaaagatattgtaactcctgaggcctggagagtgatgatgtctcttaaa
tctggtcttttggctgaaagtacctgggcgctagacactattaatattcttctgtatgat
gacagcactgttgctactttcaacctctctcagttgtctggatttcttgagcttttagta
gaatattttagaaaatgcctgattgacatttttggaatccttatggaatatgaagtggga
gatccaggccacaaagcacttgatcacaaagcagccaagaaagatgatagtcagtctttg
gcagaggatactggaaaagatgagaatgacgaatgtattgactattttgatgaagatgag
gaggagggggaggatgaaaaggtagaaggagaagaaaagagcattgttttttctactcct
ggtgccattgctgatccaagtgagaggccaaaacaagccagtaaatttgacaagctgcca
ataaagattgtaaagaaaaataatctatttgttgttgaccgatctgacaaacttggacgc
gttcaggaatttgatagtggacttctccactggcagcttggtggtggtgacacaactgag
catatccagactcactttgaaagcaagatggagattccaccacgcaggaaagcccctcct
cccttgaactctccaagcaaaaagaaggacctcgaggggaaaggtgaatctgaggagcaa
caagaaaagagtataacagcaaccattgatgatgtcctctcggctcggccaggagcacta
cctgaagactcaaactctggttcccaaacagagaccagtaaatttcccttcgggatccat
caagccaaaagccaccggaatattaaactgctagaggatgagccaaggagccgggatgag
actcctctatgcaccataactcactggcaagactccttggccaaacgctgcatctgtgtg
tcaaatatcgtccgtagcttgtcttttgtgcctggcaatgacaccgaaatgtccaaacat
ccaggcttggtgctgatcctgggaaagttgatccttcttcaccacgagcatccagaaaga
aagcgagcgccgcagacttacgagaaagaggaagaggaggacaaaggggtggcctgcagc
aaggatgagtggtggtgggactgcctcgaggtcttgagggataatacattggtcacatta
gccaacatttctgggcagctagacttgtctgcttacacagaaagcatctgtttgccaatt
ttggatggcttgctgcactggatggtgtgcccgtctgcagaggcacaggatccttttcca
accgtggggcccaactcagttctttcgcctcagagacttgtgctggagaccctgtgtaag
ctcagtatccaggacaataatgtggaccttatcttggccacccccccattcagccgtcag
gagaaactctacgctactttagttaggtacgttggggaccgcaaaaacccggtctgccga
gaaatgtccatggcgctcctatcgaaccttgcccagggggacacattagcagcaagggca
atagctgtgcagaagggaagcattggaaacttgataagcttcctggaggatggggtcact
atggcccagtaccagcagagccagcataacctcatgcacatgcagcctccgcctctggag
ccgcctagcgtagacatgatgtgcagggcagccaaggccttgctggccatggcgagagtg
gacgagaaccgctccgagttccttttgcacgagggtcgtttgctggatatctcaatatct
gctgtcctgaactctctggttgcatctgtcatctgtgatgtactttttcagattgggcag
ttatga
DBGET
integrated database retrieval system
