KEGG   Passer montanus (Eurasian tree sparrow): 120501167
Entry
120501167         CDS       T07277                                 
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120501167 (HBS1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmoa03019]
    120501167 (HBS1L)
Messenger RNA biogenesis [BR:pmoa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120501167 (HBS1L)
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N GTP_EFTU_D2 MMR_HSR1 AAA_22 DO-GTPase2
Other DBs
NCBI-GeneID: 120501167
NCBI-ProteinID: XP_039562948
LinkDB
Position
Unknown
AA seq 688 aa
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPGTFAEPLEEEYG
DEGTGAAAADCFTPTHQLTEVDRARLNSCLDQMREVLAESIPEQTMVQAALDTKFDVQKA
LDLVLSQGCKQNVKTKNKDAVILAKTTKGKTRDSQSARMESEIVPKIAKMTVSGKKQSMG
FEVPCAIAEENGHTNTPQKGLLPEDASIASGALEAVSKSTPSPQVVQVSEEQNMVPTPAK
KSSKAKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYE
QESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETPTKVITLMDAPGHKDFIPNMI
TGAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQE
RFQEITNKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRGQSSDLTQWYKGKCLLEQIDS
FKPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITL
HDEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARILIFNIEIPITK
GFPVLLHYQTVSEPATITRLLSVLHKSTGEVTKKKPKFLAKGQNALVELQTQRPVALELY
KDFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgtcgcggcacaggaacgtccgaggatataactacgacgaagactttgaagatgatgat
gtgtatggccaatcagtagaagatgattattgcatttctccttcaacagcagctcagttc
atttactccagacgagacaagccaggcacgtttgctgagccattagaagaagaatatggc
gatgaaggtactggtgctgctgctgctgattgttttacacccactcatcagttgactgaa
gttgatagagctcgtcttaattcatgccttgatcaaatgagagaagttttggcggagtcc
ataccggagcaaacaatggtgcaagcagcactggatactaaattcgatgtacaaaaggct
ttggatcttgtgctttcacaaggctgtaagcaaaatgtgaagaccaagaataaggatgct
gtgattttagcaaagactacaaaaggaaaaacaagggattcccagtcagccagaatggaa
tctgaaattgtgccaaaaattgccaaaatgacagtgtctggaaagaaacaatctatggga
tttgaagttccatgtgcaattgctgaggaaaatggccacactaatacacctcagaaagga
ctgttacctgaagatgccagtatagcttctggggcacttgaggctgtctcaaaatctact
ccttcaccccaagtagtgcaggtttcagaagagcagaatatggtgcctactccagcaaaa
aagtcaagcaaggcaaaaccacaaatagatgtgaaagcagagttggagaagagacaagga
ggaaagcaactgctgaatttggtggtaataggacatgttgatgcaggcaaaagtacttta
atgggtcatttgctgtaccttttgggaaatgtgaacaaaagaacgatgcacaaatacgaa
caggaatctaaaaaggctggtaaagcttcatttgcctatgcatgggtcttggatgaaact
ggtgaagaaagagaaaggggagtgacaatggatgtgggtatgaccaaatttgagacacca
actaaagtaattacactgatggatgctccaggccacaaggacttcattccaaatatgatc
acaggagcagcacaggctgatgtggcaattttggttgtggatgccagcagaggagagttt
gaggcaggatttgagacgggtggacaaactagagaacatggattattagtgcgctctctg
ggagtgacacagttggctgttgctgtcaataaaatggaccaggtcaattggcaacaggaa
agatttcaggaaattacaaataagcttggccaatttcttaagcaagctggctttaaggag
tcagatgtggcttatatcccaacaagtggccttggtggtgaaaatctagtcacaaggggt
cagtcaagtgacctcacacaatggtataaaggaaagtgtttgttggagcaaattgattct
ttcaagccaccacagagatcagtggataaaccatttagactgtgtgttgctgatgttttt
aaagaccaaggttcaggattttgtgtgactggtaaaatagaagcaggctatattcaggtt
ggagaacgacttctggcaatgcctcccaatgaaacttgcactgcaaaaggaatcacactg
cacgatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggc
atggatatcatcaaaatcaatgtgggctgtgtattttgtgatcccaaggaacccattaaa
gtttgtactcggttcagagctcggattctcatcttcaatattgagattccaatcactaaa
ggatttcctgtgcttttacactatcaaacagtaagtgaacctgctactattacaagactg
ttgagtgtcctgcacaaaagtactggtgaagtgacaaagaaaaaacctaagttcttggct
aaaggccagaatgctctagtagagctacaaactcaaagacctgttgctctagagttgtac
aaagattttaaagagctggggaggtttatgttacgctacagtggttccactattgctgca
ggagttgttacagagattaaagaatga

DBGET integrated database retrieval system