Passer montanus (Eurasian tree sparrow): 120501332
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Entry
120501332 CDS
T07277
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmoa03000
]
120501332 (SOX6)
Transcription factors [BR:
pmoa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120501332 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
120501332
NCBI-ProteinID:
XP_039563387
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSSKQATSPFACAADGEETMTQDLASRDKEEGNSDQHAAPHLPLHNVMHNKPHSEELPTL
VTTIQQDPEWDGVISAQHRMESESNKLCSLYSFRNTSTSPNKPDEGGRDRSELMTSVNFG
TPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMEKLNTSDLLGEIK
GTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIA
RQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITY
KPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMPSTPQPPNTTGAL
SPTGMKNEKRGTSPVTQVKDEAAQPLNLSARPKTAEPVKSPTSPTQNLFPASKSSPVTVT
SKSGIPSPLSGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQQ
PHGVDGKLPSMNNMGLNNCRNEKERTRFENLGPQLTGKPNEDGKIGPGVIDLTRPEDAEG
SKAVNGSAAKLQQYYCWPTGGATVAEARVYRDSRGRASSEPHIKRPMNAFMVWAKDERRK
ILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTC
IVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQM
TSDCSSTSASPEPSIPVIQSTYGMKTDSGSLPGNEMINGEDEIEMYEDYEDDPKSDYSSE
NEAHEAVSAN
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcaggctacctctccatttgcatgtgcagctgatggggaggaaacaatg
acccaggacttagcatcacgagacaaggaggagggcaacagtgatcagcacgcagcccct
catctgcctctacacaatgtcatgcacaacaaacctcactccgaggagctaccgaccctg
gtcaccaccatccagcaggaccccgagtgggatggagtcatctcagcccaacacagaatg
gagtcagagagtaataagttatgttccctatattccttccgaaatacctctacctcacca
aacaagcccgacgaaggaggtcgtgaccgcagcgagctaatgaccagtgttaactttgga
acgcccgagcgccgcaagggaagcctagcagatgtggtggacacactgaagcagaagaaa
ctagaagaaatgaccaggactgagcaagaagattcatcctgtatggaaaagctactttct
aaagactggaaggagaagatggaaaaattaaacacaagtgatctccttggagaaattaaa
ggtacaccagaaagcctggcagaaaaagagcgacagctctctactatgatcacccagctg
atcagcttacgggagcagctcctggctgcccatgatgagcagaaaaagctggcagcctca
caaattgaaaaacaacggcagcaaatggaccttgctcgccaacagcaagaacagattgca
agacaacagcagcaacttctgcaacagcagcacaaaatcaatctactgcagcagcaaatt
cagcaggttcagggtcacatgcctccgctcatgatcccaatttttccacacgaccagcgg
acactggcagcggctgctgcagcccagcagggattcctctttcccccaggaataacatac
aagccaggtgataactaccctgtgcagttcattccatcaacaatggcagctgctgctgct
tctggactcagccctttacagctccagcaactgtatgcagctcagctggcaagcatgcaa
gtttctcctggagccaaaatgccatctactccacaaccaccaaatacgacaggggcactt
tcacccactgggatgaaaaatgagaagagagggaccagcccggtaactcaagttaaggat
gaagcagctcagccactgaatctctcagcccgacccaaaacagctgaacctgtcaaatcc
ccaacatctccaacacagaatctcttcccagccagcaaaagcagcccggtgacagtgacg
agcaagagtggcatccccagcccgctcagtgggtctctgggaagaggatcctctttagat
atcctttccagtcttaattcacctgccctatttggggaccaggacacagtaatgaaagcc
attcaggaggctcgaaaaatgagagagcaaatccaaagggaacagcagcagcaacagcag
cctcatggtgttgatggaaagttgccctccatgaataacatgggtctaaacaactgcagg
aatgagaaggaaagaacaaggtttgaaaatttaggcccacagttaacagggaaacccaat
gaagatggaaaaattggccctggtgtcatcgatcttacaaggccagaagatgcagaaggg
agtaaagcagtgaatggctctgcagctaaactacagcagtattattgttggccaacagga
ggggccacggtggctgaagcccgggtctaccgggactcgcggggccgtgccagcagcgag
ccccacatcaagcggccgatgaacgccttcatggtctgggccaaggacgagcgccggaaa
atcctccaggccttccccgacatgcacaactccaacatcagcaaaatcctaggatctcgc
tggaagtccatgtcaaaccaagagaaacaaccttattacgaagagcaggcacgactaagt
aaaatccacctagaaaagtaccctaattacaaatacaagcctcgaccaaaacgcacctgc
attgtggatggcaagaaactgcgcattggcgaatacaagcagctgatgaggtctcgaaga
caggagatgaggcagttttttaccgtaggacaacagcctcagattccaatcaccacggga
acaggagttgtctaccctggtgctattaccatggcgaccaccacgccgtcccctcagatg
acatcagattgctccagcacctctgccagccctgagcccagcatccctgtcatccagagc
acttatggtatgaagacggacagcggaagccttcctggaaatgaaatgataaacggagag
gatgaaatagaaatgtacgaggactatgaggatgatcccaaatcagactatagtagtgaa
aacgaagcccatgaggcagtcagtgccaactga
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