Passer montanus (Eurasian tree sparrow): 120501435
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Entry
120501435 CDS
T07277
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120501435 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoa03021
]
120501435 (TAF5L)
03036 Chromosome and associated proteins [BR:
pmoa03036
]
120501435 (TAF5L)
Transcription machinery [BR:
pmoa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120501435 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
120501435 (TAF5L)
Chromosome and associated proteins [BR:
pmoa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120501435 (TAF5L)
STAGA complex
120501435 (TAF5L)
TFTC complex
120501435 (TAF5L)
SAGA complex
120501435 (TAF5L)
SLIK complex
120501435 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
TFIID_NTD2
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
WD_LRWD1
Ge1_WD40
eIF2A
Nbas_N
Motif
Other DBs
NCBI-GeneID:
120501435
NCBI-ProteinID:
XP_039563627
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MVMKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVV
SAAPCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDS
FYSRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRY
LQSDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNGLEPSEVPASILQNEAA
LDLLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLR
SRKLKSEPHLVDVSRIRLACDILDEEEEEDDNAGTEMKILRGHCGPVYSTRFLSDSSGLL
SCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYP
LRIYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSP
NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD
IRNTYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgaaacgcgtacgcacagagcagattcagatggcagtgtcctgctacctcaag
cgccgccagtatgtggactcggaaggtcccctaaaacaagggctgaggctgtgtcagact
gctgaagagatggcagctaatctcacagtccaatctgagtctggttgtgccaacgttgtg
tctgcagctccctgcctggcagagccacagcaatatgaagtacagtttggacgattacgc
aattttctgacagattcagattctcagcacagccatgaagtgatgcctcttctgtatccc
ctcttcgtctacctccatctgaacatggtccagaatggcctaaaaagcacagtggacagt
ttttacagccgcttccatggcatgttcttgcagaatgccagccagaaggatatcattgaa
cagttgcagactaccatgactattcaagatatcctgtccaacttgaagctccgggctttt
ctggacaacaaatacgtcatccgccttcaagaggacagctacaactaccttcttcgctac
ctccaaagtgacaacaacaacgccctgtgcaaagtcctgaccttgcacattcacctggat
gtgcagcctgccaagaggactgactaccagctctatgccggtgggagctcctcacgcaac
gagagcaacggcctggaacccagtgaggtgccagcttccattctgcagaatgaggcagcg
ctggatttactgcaggacagcattaaacgtgtcaaggatgggcccccttccttaaccacc
atctgtttctatgccttctataacacggagcagttgctgaacactgcagagatttcacca
aatagcaagctgctcgctgccgggttcgataattcatgtgtgaagctgtggagcctgcgc
tccaggaagttgaaatctgagccccaccttgttgatgtgtcccgcatccgtttggcttgt
gacatcctggatgaggaggaggaagaggatgacaatgcaggcacagaaatgaagatcctg
agaggacactgtggacctgtgtatagcacaaggttcctttcagacagttcaggactctta
tcttgttctgaggacatgtccatcaggtactgggacctcggaagctttacaaacactgtg
ttgtaccaaggacatgcctatcctgtctgggatttggatattagcccctgcagcctgtac
tttgccagcggttcccacgatcgcactgcaaggctctggtcgtttgatcggacgtacccg
ctgcgaatatacgcgggccatttggcggacgtggactgcatcaagttccaccccaattcc
aattacttagcgacgggctccacggacaaaaccgtgcgcctgtggagcactcagcagggc
aactcggtgcggcttttcaccgggcaccggggccccgtgctggcactcgcgttttccccc
aacggtaagtacctggcatcggcaggtgaagaccagcggctgaagctgtgggacttggca
tcaggaactctttacaaagaactgagggggcacacagacaacataaccagccttactttt
agccctgacagtagtttaattgcttcagcttcgatggacaattcagttcgggtctgggac
attcggaacacttactgcaacgcccctgcggatgggtcttccagtgaactggttggtgtg
tataccggacagatgaataatgtactgagcgtacagtttatggcctgtaatctccttcta
gtgactggaattgcacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system
