Passer montanus (Eurasian tree sparrow): 120501821 Help Entry 120501821         CDS       T07277                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism pmoa  Passer montanus (Eurasian tree sparrow) Pathway pmoa04510   Focal adhesion pmoa04512   ECM-receptor interaction pmoa04518   Integrin signaling Brite KEGG Orthology (KO) [BR:pmoa00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120501821 (COL2A1)    04518 Integrin signaling     120501821 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     120501821 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pmoa00536]     120501821 (COL2A1) Glycosaminoglycan binding proteins [BR:pmoa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120501821 (COL2A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  120501821 NCBI-ProteinID:  XP_039564454 LinkDB All DBs Position Unknown AA seq 1479 aa AA seqDB search HLPRAVPALSPRCPRAVPAAEAGSCLQDGHRYSDKDVWKPEPCRICVCDTGTVLCDEIMC EELRDCPSPEIPFGECCPICPTEQPSGKPGPKGQKGEPGDIKDVVGPRGPPGPQGPAGEQ GQRGDRGEKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKA GGAQMGVMQGPMVVSPQNPPHFPPGPLSPQGPQGFQGNPGEPGEPGAAGPMGPRGPPGPP GKPGDDGETGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGAK GESGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPAGAPGFP GAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGAKGSAGAPGIA GAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEMGPAGPQGAPGPAGEE GKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPKGATGDP GRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQPGVMGFPGPK GANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLP GPPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTD GPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGARGLT GPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGADGQPGAK GEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPP GPNGNPGPPGPPGSAGKDGPKGSRGDAGPPGRAGDPGLQGPAGPPGEKGEPGEDGPAGPD GPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPPGLT GPAGEPGREGNPGSDGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPTGKQGDR GETGAQGPMGPSGPAGARGMPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQGLPGPPGPS GDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPGNPGPP GPPGPPGTGIDMSAFAGLGQPEKGPDPGRYMRADEAAPGLRPHDAEVDATLKALNNQIES IRSPEGSRKNPARTCRDIKLCHPDWKSGDYWIDPNQGCTLDAIKVFCNMATGETCVYPSP GSIPRKNWWSSKAKEKKHVWFAETINGGFHFSYGSEDLAPNTANIQMTFLRLLSTEGSQN VTYHCRNSVAYLDEESGSLRKALLIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGRT VIEYRSQKTSRLPIVDIAPMDIGGPEQEFGVDLGPVCFL NT seq 4440 nt NT seq  +upstreamnt  +downstreamnt cacctcccccgcgctgtccccgcgctgtccccacgctgtccccgcgctgtccccgcagcc gaggctggcagctgcctgcaggacgggcaccgctacagtgacaaggacgtgtggaagccg gagccgtgccggatctgcgtgtgcgacacggggaccgtgctgtgcgacgagatcatgtgc gaggagctgcgggactgccccagccccgagatccccttcggagagtgctgccccatttgc cccaccgagcagcccagcgggaagcctggccccaagggacagaaaggtgaacccggtgac atcaaagatgtcgtaggaccccgaggacccccgggcccgcagggccccgcaggtgagcag ggacagcgaggggaccgcggcgagaagggcgagaagggtgcccccggcccccggggcagg gatggggagcccggaaccccaggaaatcccggcccccccggaccccccggacccccggga ccccccggcctgggggggaactttgcggctcagatggcggggggcttcgacgagaaggct ggaggggctcagatgggcgtcatgcagggacccatggtagtgtcaccccaaaatccccct cacttccccccaggtcccttgtccccgcagggtccccaaggattccaaggcaaccccggt gagcccggcgagcccggcgctgctggtccaatgggtccccggggacctccgggacctcct ggcaaacccggcgacgacggcgagaccggcaaacccgggaaatccggcgagcgcggcccc cccggcccccagggcgctcgtggcttccccgggacccccggcctgcctggagtcaaaggc caccggggctaccccggcctggacggcgccaagggagaggcgggagcgcccggagccaag ggcgagtccggctccccgggcgagaacggctcccccggccccatgggtccccgcgggctg cccggagagcgaggacgccccggcccctcgggcgctgcgggcgctcgtggcaacgacggc ctcccgggcccggccggaccccccggtcccgtcggccccgcaggagcccccggcttcccc ggcgcccccggctccaagggtgaagcgggtcccactggagcgcgaggacccgagggtgcc cagggaccccgcggggagtccgggacccccggctcgcccggccccgccggcgcccccggg aacccagggaccgacggcatccccggagcgaagggatcggcgggcgctccaggcatcgcc ggcgctccaggattccccggcccccgcggcccacccggaccccagggagccaccggcccg ctgggccccaagggacagacgggtgagcccggcatcgcaggattcaaaggcgagcaggga cccaagggagagatgggccccgcaggaccccagggtgcccccggaccggccggggaggaa gggaagagaggagcccgcggagaacccggagctgctggacctttggggccacctggagag aggggagctcccggcaaccgcggcttccccgggcaggacgggctggccggccccaagggt gccccgggcgagcgtggccctgctggcctggccggccccaaaggagccaccggcgacccc ggacgccccggagagcccggcctgcctggagccaggggtctcacaggtcgccctggggac gctgggccccaaggcaaagtcggccccacaggtgcccctggcgaggacggacgtcccgga ccccccggcccgcagggggctcggggccagcctggcgtgatggggttccctggtcccaaa ggtgccaatggtgagcctggaaaagctggtgaaaaaggacttcccggagcaccagggctg aggggacttcctggcaaggacggagagactggagccgccggacccccaggacctgctggc ccagcaggggagaggggagagcaaggagcccccggcccctccggcttccagggactgcca gggccaccaggtccccccggcgagagcggcaaacccggagatcagggcgttcctggagaa gctggagcccccgggcttgtgggtcccaggggcgagcgcggtttccccggcgagcgcggc tctcctggcgcccagggcctgcagggtccccgcggcctccccggcacgcccggcaccgac ggacccaagggtgccaccggccccgccggccccaacggcgcccaggggcccccggggctg caggggatgcccggggagagaggagccgctggcatcgccggtcccaagggggacagggga gacgttggagagaagggacccgagggagcgcctggaaaggacggagctcgaggtctgacc ggtcccatcggcccccccggccccgctggccccaacggcgagaagggcgagtccggcccc cccggcccatccggagctgccggtgcccgcggtgcccccggagagcgcggagagcccgga gcccccggccctgccggattcgccggccccccgggcgccgatggccagcctggagccaag ggcgagcagggggagcccggccagaagggtgacgccggagcccctgggcctcagggtccc tccggggctcctggaccgcagggtcccacaggtgtcaccggtcccaaaggagcccggggt gcccagggacccccgggagccaccggattccccggagccgccggacgtgttggacccccc ggtcccaatggtaaccccggcccgcccgggccccccggctccgcgggcaaggacggcccc aagggctctcggggcgacgcgggacccccgggccgagcgggggacccggggctgcagggc cccgccggcccccccggcgagaagggcgagcccggcgaggacggccccgcgggcccggac ggtccccccggtccccaggggctggcaggacagcgcggcatcgtggggctgccggggcag cgcggcgagcgcggattcccggggctgcccggaccctcgggagagcctggaaaacaggga gcacctggatctgctggtgaccggggaccccccgggcctgtgggaccccccgggctgaca gggccagctggagagcccggcagggagggaaatcccggctctgatggacccccgggcagg gatggggcagcaggagtgaagggtgatcgtggcgagactggccccgtgggtgctcccggt gctcccggcgctcccggcgctccgggccctgtgggacccactggaaaacagggagacagg ggagagacgggtgctcagggtcccatgggtccctccggccccgctggcgcccgggggatg ccgggtccccaggggccgcgcggtgacaaaggcgaggcgggcgaggctggagagcgcggc ctgaaggggcaccggggcttcaccggcctccaggggctgcccgggccccccggtccttct ggagaccagggcgctgccgggcccgcgggtccctccgggcccaggggtccccccggccct gtgggcccttcaggcaaggacggctccaatgggatgcccggacccatcggcccccccgga ccccgcgggaggagcggcgagcccggcccggcgggtccccccgggaaccccggcccgccc ggcccccccgggccccccggcactggcattgacatgtcggcgttcgcggggctggggcag cccgagaagggccccgaccccgggcgctacatgcgggcagacgaggcggcgccggggctg cggccgcacgacgccgaggtggacgccaccctcaaggccctcaacaaccagatcgagagc atccgcagccccgagggctcccgcaagaacccggccaggacctgccgagacatcaaactc tgccaccccgactggaagagcggcgattactggatcgaccccaaccagggctgcaccctg gacgccatcaaggtcttctgcaacatggccacgggggagacgtgcgtgtaccccagcccc ggcagcatccccaggaagaactggtggagcagcaaggccaaggagaagaagcacgtctgg ttcgccgagaccatcaacggcggcttccacttcagctacggctctgaggacctggcgccc aacacggccaacatccagatgaccttcctgaggctgctgtccaccgagggctcccagaac gtcacctaccactgccgcaacagcgtggcctacctggacgaggagtcgggcagcctgagg aaggctctgctcatccagggctccaacgacgtggagatccgcgccgagggcaacagcagg ttcacctacagcgtgctggaggatggctgcacgaaacacaccgggaagtggggcaggact gtcatcgagtaccgctcgcagaagacctcgcgcctgcccatcgtggacattgcacctatg gacattggggggcccgagcaggagtttggggtcgacctcggccccgtctgcttcttgtaa

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