Passer montanus (Eurasian tree sparrow): 120501871
Help
Entry
120501871 CDS
T07277
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmoa04131
]
120501871
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmoa04147
]
120501871
Membrane trafficking [BR:
pmoa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120501871
Exosome [BR:
pmoa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120501871
Exosomal proteins of bladder cancer cells
120501871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
TPR_COPA_B
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
WD40_RFWD3
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
120501871
NCBI-ProteinID:
XP_039564579
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MGKNPEKKQEFCAGWSWACPGLEFRGFFLDFPLELQVWNYKLRRCLFTLLGHLDYIRTTF
FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVR
VWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPSMPLI
VSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSK
RTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMLVFKLERERPALAVHGNSLFYVKDRF
LRQLDFGSSRDVAVMQLRSGSKFPVFSMSYNPAENAVLLCTRASNLENSTYDLYTIPKDA
DSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSILIKNLKNEITKKVPVPNCDEIFYAG
TGNLLLRDSDSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAILICNRKLES
LCQIHENIRVKSGAWDESGVFIYTTSNHIKYAVTSGDHGIIRMLDLPIYVTRVKGNNVYC
LDRECRPRVLTIDPTEFRFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQRKGYPEVALH
FVKDEKTRFSLALECGNIEIALGAAKALDDKGCWEKLGEVALLQGNHQVVEMCYQRTKNF
DRLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILRNCGQKSLAFL
TAATHGLDEEAESLRESFDPEKETIPAVDPEARLLQPPAPVLPLDTNWPLLTVSKGFFEG
SIAGKGKGGALAADIDMDAVGTEGWGEDAELQLDEDGFVDAGEGFGEEGTGKGQEEGGGW
EVEEDLDLPPELDVPAGPAGTAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAM
RLLHDQVGVTNFGPYKQLFLQTFSRGRTTFQALPSLPAMYGYPHRNWKEAGLKNALPAVG
LKLNDLIQRLQLCYQLTTAGKFEEAVEKFRLILLSVPLLVVDNKQEIAEAQQLVAICREY
IVGLSMEIERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKS
AATFARRLLELGPKPEVAQQTRKILAACEKNPVDSHQLNYDQHNPFDICAASYRPIYRGK
AVEKCPLSGACYSPEFRGQICRVTTVTEIGKDVLGLRISPLQFR
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaatcctgaaaaaaagcaggaattctgtgctgggtggagctgggcctgtccc
ggtctggaattccggggatttttcctggatttccccctggaattgcaggtttggaattac
aaactgcggcgctgcctcttcaccctgctgggacacctggactacatccgcaccaccttc
ttccaccacgaatatccctggatcctgagcgcctccgacgaccaaaccatccgcgtgtgg
aactggcagagccgcacctgcgtctgcgtgctgacggggcacaaccactacgtgatgtgc
gcccagttccaccccagcgaggacctggtggtgtcggccagcctggaccagactgtccgg
gtgtgggacatctccgggctgaggaagaagaacctgtcccccggggccgtggagtcggac
gtgcgcggcatcaccggcgtggatctgttcggcaccaccgacgccgtggtcaagcacgtg
ctggagggccacgaccggggggtgaactgggctgccttccacccctccatgcccctcatc
gtgtcgggggccgacgaccgccaggtgaagatctggaggatgaacgagtccaaggcctgg
gaggtggacacgtgccggggccactacaacaacgtttcctgcgccgttttccacccgcgc
caggagctgatcctcagcaactccgaggacaagagcatccgggtgtgggacatgtccaag
cggactggagtccaaacgttccggcgcgaccacgaccgcttctgggtgctggcggcgcat
cccaacctcaacctgtttgctgctggacacgacgggggcatgctggtgttcaagctggag
cgggagcggccggcgctggccgtgcacgggaactccctgttctacgtcaaggaccgcttc
ctgcggcagctcgacttcggcagctcccgcgacgtggccgtgatgcagctgcgcagcggc
tccaagttcccggtgttcagcatgagctacaacccagctgagaatgccgtgctgctctgc
actcgagccagcaacctggagaacagcacctacgacctctacaccattcccaaggatgca
gattcccaaaatcctgatgctccggaggggaagcgctcctcggggctcacggccgtgtgg
gtggcgcggaaccgattcgccgtcctggacaggatgcactcgatcctgatcaagaacctg
aagaacgagatcaccaagaaggttccggttcccaactgcgacgagattttctacgcgggc
acggggaacctgctcctcagggactccgactccatcaccctcttcgacgtccagcagaaa
aggactttggcctcggtgaagatctccaaggtgaagtacgtgatctggtcggccgacatg
tcccacgtggccctgctggccaagcacgccatcctgatctgtaaccggaagctggagtcg
ctgtgccagatccacgagaacatccgggtgaagagcggcgcctgggacgagagcggcgtc
ttcatctacaccaccagcaaccacatcaaatacgccgtcacctcgggggatcacgggatc
atccgcatgctggacctgcccatctacgtgacgcgggtgaagggcaacaacgtctactgc
ctggaccgggagtgccggccccgcgtgctcaccatcgaccccaccgagttccgcttcaaa
ctcgccctcatcaacaggaagtacgacgaggtgctgcacatggtgcggaacgccaagctg
gtggggcagtcgatcatcgcgtacctgcagcgcaagggctaccccgaggtggccctgcac
ttcgtcaaggacgagaagacgcgcttcagcctggccctggagtgcggcaacatcgagatc
gccctgggggcagccaaggccctggacgacaagggctgctgggagaagctgggcgaggtg
gccctgctgcagggcaaccaccaggtggtggagatgtgctaccagcgcaccaagaacttc
gaccgcctctccttcctctacctcatcaccggcaacctggagaagctccgcaagatgatg
aagatcgcggagatccggaaggacatgagcgggcactaccagaacgcgctctacctgggg
gacgtggccgagagggtgcggatcctgcggaactgcggccagaagtccctggcgttcctg
acggccgccacgcacgggctggacgaggaggccgagagcctgcgggaatccttcgatccc
gagaaggagacgatcccggccgtggatcccgaggcgcggctgctgcagccgccggccccg
gtgctgcccctggacaccaactggcccctgctgaccgtgtccaagggcttcttcgagggc
tccatcgccgggaaagggaaaggaggagccctggctgctgacattgacatggacgccgtg
ggcaccgagggctggggcgaggacgccgagctgcagctggatgaagatggatttgtggat
gctggggaaggatttggagaggaaggaacgggaaaaggccaggaggaaggaggaggatgg
gaggtggaagaagatttggatcttccccctgagctggatgtccctgccggccctgcagga
acagctgaggatggattcttcgtgcctcccaccaaaggcaccagcccagcccaggtgtgg
tgcaacaattcccagctccccgtggatcacatcctggcaggatccttcgagacagccatg
aggctgctccatgaccaggtgggagtgaccaacttcgggccctacaagcagctcttcctg
cagaccttctcccggggccggacgacgttccaggcccttcccagcctccccgccatgtac
ggatacccacaccgcaactggaaggaggccgggctgaagaacgcgctgccggccgtgggg
ctgaagctgaacgacctcatccagcggctgcagctctgctaccagctgaccacggccggc
aagttcgaggaggccgtggagaaattccggctgatcctgctcagcgtgcccctgctggtg
gtggacaacaagcaggagatcgccgaggcacagcagctggtcgccatatgccgggaatac
atcgtggggttgtccatggagatcgagaggaagaagctgcccaaggagacgctggagcag
cagaagaggatctgtgagatggccgcctacttcacacactccaacctgcagcccgtgcac
atgatcctggtgctccgcacagccctcaacctcttcttcaagctcaagaacttcaaaagc
gccgccaccttcgcccggcgcctgcttgagctcggccccaagcctgaggtggcccagcag
acgcggaagatcctggcggcgtgcgagaagaaccccgtcgacagccaccagctgaactac
gaccagcacaaccccttcgacatctgcgccgcctcctaccgccccatctaccgcggcaag
gccgtggagaagtgtcccctcagcggggcctgctacagccccgagttccggggacagatc
tgccgcgtcaccacggtgacggagatcgggaaggacgtgctggggctgcgcatcagcccc
ctccagttccgctag
DBGET
integrated database retrieval system
