Passer montanus (Eurasian tree sparrow): 120501968
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Entry
120501968 CDS
T07277
Symbol
TAF5
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120501968 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoa03021
]
120501968 (TAF5)
03036 Chromosome and associated proteins [BR:
pmoa03036
]
120501968 (TAF5)
Transcription machinery [BR:
pmoa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120501968 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
120501968 (TAF5)
Chromosome and associated proteins [BR:
pmoa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120501968 (TAF5)
STAGA complex
120501968 (TAF5)
TFTC complex
120501968 (TAF5)
SAGA complex
120501968 (TAF5)
SLIK complex
120501968 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
120501968
NCBI-ProteinID:
XP_039564822
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MAALHEEPAEVAAVQPDPEAGTPPXXXXXXXXAGGDAAPPKPAAPGPAASPAALDRQTLV
AVLQFLRRSNLRESEEILRREARLLGDDLGGAALSPGSAGLLAGSGSDGDSGEALLGRGT
GAAAVAIGGSVATVATSSPGVAAVAAVPPGKVGGAVVVEDQPDVSAVLSAYNQQGDPTLY
EEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHESEAKSFFERFHGDQECY
YQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQ
EHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEFDVPLDDEDEEGE
NEEGKPKKKKPKKDNVGSKSKKQDPNAPPQNRIPLPELKDSDKLDKVMNMKEAARRVRLG
PECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKTAADLS
LIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQT
FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTR
FHPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVL
LWDIGHGLMVGELKGHTDTVYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTT
ATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAGAYSSQ
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgcatgaggagccggcggaggtggcagcggtgcagccggaccccgaggcg
gggacgccgccgnnnnnnnnnnnnnnnnnnnnnngagccggtggggatgcggcacccccg
aagcccgcggcgccgggcccggccgcctcgccggcggcgttggaccggcagacgcttgtg
gccgtgctgcagttcctgcggcgcagcaacctccgcgagtccgaggagatcctgcggcgc
gaagcccgcctgctcggcgacgacctgggtggcgccgcgctgagccccggcagcgccggg
ctcctggcgggctccggcagcgatggggactccggcgaggcgctgctcggccggggcacc
ggcgctgccgccgtcgccataggaggcagcgtcgccactgtcgcgacttccagccccggg
gtggctgcggttgccgccgtgccgccggggaaagtcgggggcgcggtggttgtggaggac
cagccggacgtgagcgcggtgctgtcggcctacaaccagcaaggggaccccacgctgtac
gaggagtactacagcgggctcaaacacttcatcgagtgctccctggactgtcaccgggca
gagctgtctcagctcttttatcctctctttgtgcacatgtacctggaattggtctacaat
caacatgagagtgaggcaaagtctttttttgaaagatttcatggggatcaggagtgctat
taccaggatgacctgcgtgtactgtcgagcttaaccaaaaaagaacacatgaaaggcaac
gagaccatgctggatttccgaacaagcaagtttgtgctgcgcatttcccgtgactcttac
cagctcctgaagaggcatcttcaggaaaagcagaacaatcagatctggaacattgttcag
gagcatctttacattgatatctttgatggaatgcctcgcagtaaacaacagatagatgct
atggttggaagcttggctggggaggcaaaacgagaggctaataaagcaaaggttttcttc
ggcttattgaaagaaccagagtttgatgtgcctttggatgatgaggatgaagaaggagaa
aatgaggaaggaaagccaaagaagaaaaaacctaaaaaagataatgtagggtcaaaaagt
aaaaagcaggaccctaatgctcctccccaaaacagaattcctctgccagaactgaaagac
tctgacaagctggataaagtaatgaatatgaaggaagctgcgaggcgagtacgtcttggg
ccagagtgcctgccctccatctgtttctacacattccttaatgcttaccagggtctgact
gcagtggatatcacagatgactccagcatgattgtaggaggctttgctgactctactgtc
agagtgtggtctgtgactccaaaaaagctacgcagtgtgaaaacagctgcagacctcagt
ctcattgacaaagaatcagatgatgtcttggagaggatcatggatgagaaaacagcaagt
gagttgaagattttatatggtcacagtggacctgtctatggcaccagcttcagtcctgat
aggaactatctgttgtcctgttctgaggatggcactgtgagattgtggagtctccaaaca
ttcacgtgtttggtgggatacaaaggacacaattatccagtttgggatacacagttctca
ccttatggttattactttgtgtctggtggacatgacagagtggctcgtctgtgggcaaca
gatcactaccagccattacggatcttcgctggccatcttgcagatgtgacgtgtacccga
tttcatccaaactccaactatattgctacaggctcagcagacaggactataaggctctgg
gatgttttgaatgggaattgtgtaagaatattcactggacataagggaccaattcattca
ctggcattttctcctaatggacgattcctggctactggagcaacagatggaagagttctg
ctgtgggatattggacatggcctgatggttggcgaattgaaggggcacacagacactgtc
tacgcactcagattcagtagggatggggagatcttggcatcaggttcaatggataacaca
gttcgtctgtgggatgctgtgaaggcatttgaagatttagaaaccgatgactttactaca
gccactggacacataaacttgcctgaaaactcacaggacttgctactgggcacgtacatg
actaaatcaaccccagttgttcatctccacttcacacgcaggaacctgctgctggctgca
ggagcctatagctcacagtag
DBGET
integrated database retrieval system
