Passer montanus (Eurasian tree sparrow): 120502027
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Entry
120502027 CDS
T07277
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03410
Base excision repair
pmoa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120502027 (POLL)
03450 Non-homologous end-joining
120502027 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoa03400
]
120502027 (POLL)
Enzymes [BR:
pmoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120502027 (POLL)
DNA repair and recombination proteins [BR:
pmoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120502027 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
120502027 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
HHH_5
NTP_transf_2
BRCT_2
HHH
PTCB-BRCT
IMS_HHH
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
120502027
NCBI-ProteinID:
XP_039564972
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MEPRGIVKAFPKRKKVRDDSEKSIPPKILKEQGAEIPEAEWLKPVVAYVLQAGLGRARAE
LFRRQIAQHGGVVHGQLCSEVTHAIVAEDMDCERAFRLLGLSRLPPGLRLVKAAWLSACL
RDQKLLSTAGYGVSIPRRYLEEEELQKEQQQILDREKIQLPAEEGAVKLSTESQVKDSSQ
QGLGTLGQQQLAGKYSDDEDSEGEDAGVTQGDLEALISGHYPEKSSEEISDSSDTVAQPP
SKWVCAQSSNTKKENHNQCITEKLEVLAKAYSVQGDKWRALGYSKAINALKSYHKPVTSY
QEACKIPGIGKRMAEKILEILESGHLRKLDHISESVPVLELFSNIWGAGVKTAQMWYQQG
FRTLDDIRTKATLTSQQAVGLKHYTDFLERMPREEAAEIEQTVRQAALALKPGLVCVACG
SYRRGKATCGDVDVLVTHPDGQSHRGVFSKLLSSLRRSGFLTDDLVSQEDNGDQQKYLGV
CRLPGPARRHRRLDIIVVPYREFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSSAV
VRGPGGAKVAAGHALPTPTERDVFLQLGLPYREPSERDW
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggagccacgggggattgtcaaagcctttcccaagaggaagaaggtgagggatgactcg
gagaaaagcatccctccaaagatcctgaaagagcaaggagcagagatacccgaggcagag
tggctgaagccagtcgtcgcctacgtgctgcaagccggcctggggcgggcccgggccgag
ctcttccgcaggcagattgcccagcacgggggcgtggttcacggccagctctgctcggag
gtgacacacgccatcgtggccgaggacatggactgcgagcgcgcctttcggctcctcggg
ttaagcaggctgccccccgggctgcggctggtgaaggcagcctggctcagtgcttgcctt
agagaccagaagctgctgagtactgctggctatggtgtctccatcccgcgcaggtacctg
gaggaggaggaattgcagaaagaacagcaacagatcctggacagagaaaaaatccagctc
ccagcagaggagggagcagtgaaactgagcactgaatcacaggtgaaggattcctcacag
caaggcttgggcacccttggacagcagcaactggctgggaaatattctgatgatgaagac
agtgaaggagaagatgctggtgtcacccagggagacctggaagcattgatttctggccac
taccctgagaaatcatcagaggagatcagtgatagctctgacacagtggcccagcctccc
agcaagtgggtttgtgcccagtcttccaacaccaagaaggaaaatcacaaccaatgcatc
acagagaagctggaagtgctggcaaaggcttactctgtccagggggacaagtggagagct
ctgggctattccaaagcaatcaatgcactcaagagttaccacaaaccagtcacctcctac
caggaagcctgtaaaatccctgggattgggaagcgcatggcagagaagatcctggagatc
ttggagagtgggcacctgcgcaagctggatcacatcagtgagagcgtgcctgtgctggag
ttattttccaacatctggggagcaggggtcaagacagctcagatgtggtaccagcagggt
ttccggacgctggatgacatccgcaccaaggccactctgaccagccagcaggctgtgggg
ctgaagcactacacggatttcctggagcgcatgcctcgggaggaagctgcagaaatagag
cagactgtcagacaagctgccctggccctgaagcctggccttgtgtgtgttgcctgtggc
tcctaccgtcgggggaaggccacctgtggagatgtggatgtgctggtcactcacccggat
gggcagtctcaccgtggggtgttcagcaagctgctcagcagcctccgcaggagcggcttc
cttacagatgacctggtgagccaggaggacaacggtgaccagcagaagtacctgggcgtg
tgccgcctgcccgggccggcgcggcggcaccgccggctcgacatcatcgtggtgccgtac
cgcgagttcgcctgcgccctgctctacttcacgggctcggctcacttcaaccgctccatg
cgcgccctggccaagaccaagggcatgagcctgtcggagcacgcgctcagctcggccgtg
gtgcgaggccctgggggtgccaaggtggcagctggccatgccctgcccacccccaccgag
agagacgtcttccttcagctggggctgccttaccgggagccctccgaacgcgactggtga
DBGET
integrated database retrieval system