Passer montanus (Eurasian tree sparrow): 120502053
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Entry
120502053 CDS
T07277
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmoa03016
]
120502053 (TRUB1)
Enzymes [BR:
pmoa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
120502053 (TRUB1)
Transfer RNA biogenesis [BR:
pmoa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
120502053 (TRUB1)
Prokaryotic type
120502053 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
DMA
Motif
Other DBs
NCBI-GeneID:
120502053
NCBI-ProteinID:
XP_039565030
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MAGEAGGSALGRAADKLFSLSGLFAVRKPKGPTSAAVLNLLKERLLAEAGVQTKGNKRNK
VLKIGHGGTLDSAATGVLVVGIGKGTKMLGTMLAGSKKYTAIGMLGKATDTLDATGKVTE
EKPYDQVTKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGKAVEAKPARPVRV
YSLSLQQFQPPLFTLGKDVECDGGFYVRSLVNDIGKVCHWLKISQIPRSAVFLEPEGQRG
TRGAGNNNQPILVLWWAAPSFTSSAGFQLPCDPVLPALPSSIFRAELLGHSSTILHPDPK
HSTCEPL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggaggcgggcggctccgcgctgggccgcgcggccgacaagctcttctcgctc
agcgggctcttcgccgtccgcaagcccaagggacccacctcggccgccgtgctcaacctg
ctcaaggagaggctgctggcagaagctggtgtgcaaacaaaagggaacaaaagaaataag
gttttgaaaattggacatggaggaactttggacagtgcagccacaggagttctggtggtt
ggtattggaaaaggaacaaaaatgctggggactatgttggcaggttccaagaagtacact
gccattggaatgctgggcaaggccactgatacattagatgctacaggaaaagtaactgaa
gaaaaaccttatgaccaagtaacgaaaggagatcttgaaaatgttcttcaaaagttcaca
ggggacattatgcaagttcccccactctattctgctttgaagaaggatggagaaaggctt
tcaactctgatgaagagagggaaagcagtagaagcaaagcctgctcggccagtgagagtg
tacagcctttctctccagcagttccagccaccactgttcacgctgggtaaagatgttgaa
tgtgatggtggcttttatgtcaggagcctggtcaatgacattggcaaagtgtgccattgg
ctgaagatttcacagataccaaggagtgcagtcttcctggagcctgaggggcagagaggc
accagaggagcagggaataataaccagcccatacttgtgctgtggtgggctgccccatcc
tttaccagttctgctgggttccagctgccctgtgaccctgtgcttccagccctgcccagc
agcatcttcagagccgagctcctgggccacagcagcacaatccttcatccagacccgaag
cacagcacctgtgagcccctttga
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