Passer montanus (Eurasian tree sparrow): 120502096
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Entry
120502096 CDS
T07277
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120502096 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmoa03036
]
120502096 (ERCC6)
03400 DNA repair and recombination proteins [BR:
pmoa03400
]
120502096 (ERCC6)
Chromosome and associated proteins [BR:
pmoa03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
120502096 (ERCC6)
DNA repair and recombination proteins [BR:
pmoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
120502096 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
DEAD
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
120502096
NCBI-ProteinID:
XP_039565100
LinkDB
All DBs
Position
Unknown
AA seq
1489 aa
AA seq
DB search
MPTDKSPLPDSIQEPESATTSSSDCLHNDEDLGTEQENGICDNGVGNSIRVPNSDCQAST
SMAVPLEVPRRGHPLLQIDRQQIQSVSCSAHAAELKDLGVDVYDQDVLEQGVLQQVDNAI
NEATKAAKIANASKEYESVQEDLRSCTTSLRHINKIIEELSPQAADNKNINRKLDSVKRQ
KYNKEQQLKKIKAKQKRLQGILGLTDFADEANEIEYEEDEEPGPSSLGSMLMPAQETEWA
ELIRTGQMTPFGTKIPQKPERKARQLRLNEASDFEKYLADQAKLSFERKKLSRHKGAKKK
AQAKNVQCVAPAAATKEKSGKALSKTDKRLKKHLRELQKHALQIHSKARIPKEDKYLGAK
KCRHEQEDDSGESEYVPDEELFDPEAAEEEEEQASSLAENDSDYELKSLSRKKKHRVKKG
FKEAENDADFVPSSEEEEHSSGKHKVKRWRDDGDVNYYKQRLRKWQKERLKDKEHQTAEE
LSEESDVEFEEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIA
FLAGLSYSNMRTRGSNYRYQGLGPTVIVCPATVLHQWVKEFHTWWPPFRVAVLHETGSYT
KSKAKLIHEIASCHGILITSYSYIRLMQDDIHTYDWHYVILDEGHKIRNPNAAVTLACKQ
FRTPHRIILSGSPMQNNLKELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYCNASPVQV
KTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTEEQRQIYQNYINSKE
VYQILNGDMQILLGLSTLRKICNHPDFVADSPRILKSVPDAESEDPNQFGYWKRSGKMIV
VESLLKIWHKQGHRVLFFTQSRQMMQILEVFVRYRNYSYLRMDGTTAVASRQPLVTKYNE
DKSIFLFLLTTRVGGIGVNLVGADRVIIYDPDWNPSVDTQARERAWRIGQKKEVTVYRLL
TAGTIEEKIYHRQIFKQFLTNRVLKDPKQNRFFKSNDLYELFTLNSPDVSQGTETSAIFA
GTGSDVQVPKPPANGTSKCDVHLAESSSRKKKKSSNSYSTIHVKDSSSKAIETSEESEGT
SEAFDQNSYTKDNAQAAADTNSFNKSREECLESDDKCMSQSVPGSAGSAENAEGLTAPVA
GEGCEAANADARTDLSLTCDAAGSWQKQDDKTEDGQFDNNHFKCISKTKHKVDMLSHESH
RDKSKKKHHKDAKFEGKRIPHLVKQKQYRRENSEEQDSKKNDDYVLQKLFKKSGVHSVMK
HDAIMDASSADHVLEEAEASRVAQDALRALRLSRQQCLGAASGVPTWTGTSGLSGAPSGI
KSRFGQKRNSMLLSSQSTCASPAKKHKDGDTIKKQNIRKCSSSEHFSGKSGESSSSALDS
SSLLARMRARNHLVLPQQTRNEDDENHQPAPAPVQGSTEYDELLVDLRNFLAFQARVDGE
ASTRELLQEFESKLPAEHSCVFRELLRNICTFHRSPNGEGVWRLKPEFR
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagacaagagtcccctgccagacagtatccaagaaccagagtctgccactact
tcaagcagcgattgcctgcataatgatgaggacttgggcactgagcaggaaaatggcatt
tgtgacaatggtgtgggtaatagtatcagagttcccaactctgactgccaggcttccact
tccatggctgttcctttggaggtgcccagaagaggacatcctctcttacagatcgacagg
cagcagattcagtctgtctcatgtagtgcacatgctgctgagctcaaagatttgggagtt
gatgtctatgaccaggatgtgttggagcaaggagttcttcagcaagtagataatgcaatt
aacgaagcgactaaagcagcaaaaatagctaatgcatcaaaagagtatgagtcagtacag
gaggatttgagatcatgtacaacatctctgagacatataaataaaattattgaggaactt
tcacctcaagctgctgacaacaaaaatattaacagaaaactagattctgtgaagcggcaa
aaatataacaaggagcaacagctgaagaagataaaagcaaagcaaaaacgacttcaagga
atacttggtttaacagactttgctgatgaagcaaatgagattgaatatgaggaagatgaa
gaacctggtccatcatcccttggcagtatgcttatgcctgctcaggaaacagagtgggcc
gagctcatccgaactggtcagatgactccatttggaactaaaatacctcagaagccagag
aggaaggcacgacagttaaggctaaatgaagcatctgattttgagaagtacttagcagac
caggctaaattgtcatttgaaagaaagaaattatcccgtcacaaaggagcaaagaagaaa
gcacaagccaaaaatgttcagtgtgtggctcctgcagctgccacaaaggaaaaaagtggt
aaagccctctcaaaaacagataagcgtttaaaaaaacacttgagagagcttcagaagcat
gcccttcagattcattcaaaggccagaattccaaaggaagacaaatatcttggggccaag
aagtgcaggcatgaacaagaggatgatagtggggagtctgagtatgtacctgatgaggag
ctctttgatccagaagcagcagaagaggaagaagagcaggcatcttctcttgctgagaat
gattctgattatgagcttaagagtttatcaagaaaaaaaaaacatagggtgaagaagggt
tttaaagaagctgaaaatgatgctgacttcgttccaagctctgaggaagaggaacactca
tcagggaagcacaaagtgaaacgatggagagatgatggagatgtgaactattataaacag
agactaaggaagtggcaaaaagaacgtttgaaggataaagaacatcaaacagctgaggaa
ctttctgaagaaagtgatgttgaatttgaagagggtttcaaagtaccaggatttctcttc
aaaaagctttttaagtatcagcagacaggtgttaggtggctttgggaattgcactgccag
caggcaggaggaattctgggagatgagatgggattgggcaagaccattcagataattgcc
ttcttggcaggtctgagctacagcaatatgaggactcgtggttcaaattacaggtaccag
ggattgggtccaacagtgattgtttgtccagctactgtgttgcatcagtgggtaaaagaa
ttccacacttggtggccgccatttagagttgctgtgctccatgaaactggttcttataca
aagagtaaggcaaaactcattcatgaaattgcttcatgccatggaattttgattacatcg
tactcgtacattcgtctgatgcaggacgacatccacacgtatgattggcattatgtcatc
ctggatgagggtcacaaaatccgaaatccaaatgctgcagtcacactcgcatgcaagcag
ttccgcacaccccatcgaatcatcttgtctggctcccctatgcaaaataacctaaaggag
ctctggtccctctttgactttatattcccaggaaaattgggaaccctccctgtgttcatg
gagcagttttctgtcccaataaccatgggaggatattgcaatgcctctcctgtccaggta
aaaactgcatacaaatgtgcctgtgtgttacgggacaccataaatccctacttgctgcga
agaatgaaggctgatgtaaaaatgagtctttcacttccagacaaaaatgaacaggtcctc
ttttgccgtttgacagaggagcagcgtcaaatctatcaaaattacatcaactctaaagaa
gtttaccagattctcaatggagacatgcagattctcttaggactgtcaactttgagaaag
atttgcaatcaccctgacttcgttgctgatagtcccagaattttgaagagtgtgccagat
gctgaatcagaggatccaaatcagtttggatattggaaacgttctggaaaaatgatagtg
gtagaatccttgctgaaaatatggcacaagcaaggtcacagagtgctgttttttactcag
tcaagacagatgatgcagatacttgaagtctttgtgagatacagaaactattcctacctc
aggatggatggcaccacagcagtagcttccagacagcctcttgtaacaaaatacaatgag
gacaaatccatatttctttttcttctaacaactcgtgttggtggcattggagttaacttg
gttggtgctgaccgggttattatttatgatcctgactggaatcccagtgtagacacacag
gctcgggaacgtgcttggagaataggccagaagaaagaggtgactgtgtacaggctgctc
actgcagggactattgaggagaagatataccacagacaaatcttcaaacaatttttaaca
aacagagtgctgaaagaccctaagcagaatcgcttcttcaaatccaatgacctttatgaa
ctatttactctgaacagcccagatgtgtctcaggggacagaaacaagtgcaatttttgca
ggtactggttcagatgttcaagttccaaagccacctgctaatggcacttctaaatgtgat
gtccatcttgcagaaagcagctcacgcaagaagaagaagtcctccaattcctattccacc
atacatgtcaaagattcttcttctaaagcaatagagacaagtgaggaaagcgagggaact
tcagaagcgtttgaccaaaatagctacacaaaagataatgcacaagctgctgctgataca
aattcattcaataaaagcagggaggaatgcttggaaagtgatgacaagtgcatgtcccag
tcagtgccaggcagtgcagggtctgcagagaatgctgaaggtctgactgccccagtggct
ggtgagggatgtgaagcagctaatgcagatgccaggacagatcttagcctcacttgtgat
gcagctggttcttggcaaaagcaggatgataaaactgaagatgggcaatttgataataat
cattttaagtgtatctcaaaaacaaaacataaggtggatatgctgtcacatgagagccac
agagataagtctaagaagaaacatcacaaagatgccaaatttgaagggaagcgcattcct
catctagtgaaacaaaagcaatacagaagggagaacagtgaagagcaagactcaaagaaa
aatgatgactatgtcttgcagaaacttttcaaaaaatcaggggtacacagtgttatgaag
catgatgccattatggatgcttccagtgcagatcatgtgctggaggaagcagaagcgagc
agagtggcccaggacgccttgagagccctaagactctctcgtcagcagtgtttaggagct
gcttctggtgtgccaacctggacaggcacgagtggtctttcaggtgcaccatcaggaata
aagagtcggtttggtcaaaaaagaaactccatgctgctttcttcacagtccacttgtgca
tcacctgcaaagaagcacaaggatggagatacaataaagaaacaaaatataaggaagtgt
agttccagtgagcacttcagtggaaagtctggagaatcgtcatccagtgctctggactct
tcatctttattagctcgtatgagggcaagaaaccaccttgttttaccacagcagacaagg
aatgaggacgatgagaatcatcagccagcacctgccccagtccagggttcaacagagtac
gatgagctgctcgtggatctgcggaacttcctggcgttccaggcgcgcgtggacggcgag
gccagcactcgggagctgctgcaggagtttgagtccaaactgcctgcggagcactcctgt
gtctttagagaactgctccgcaatatctgcaccttccacaggagcccaaacggggaaggg
gtctggaggctaaagccagaattccgatga
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integrated database retrieval system
