Passer montanus (Eurasian tree sparrow): 120502156
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Entry
120502156 CDS
T07277
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120502156 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120502156 (EXOSC1)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120502156 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
120502156 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
120502156
NCBI-ProteinID:
XP_039565236
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MAPPARYCVPGERLCSTEQATAGSGTYTRHGFIFSSLAGCLERKNEDSELPVVSVVRDSE
SQLLPNVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYK
SFRPSDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPRTHTK
EFRKVARVQPQFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccgcacggtactgcgtccctggcgagcggctgtgcagcacggagcaggcc
acggctggcagcggcacctacactcgtcatggcttcatcttctcctcgctggcgggctgt
ctggagagaaagaatgaggacagcgagctgcccgtggtgtcggtggtgagagacagcgag
tcccagctgctgcccaacgtgggggctgtggtgacatgcaaggtctgcagcattaactct
cgctttgccaaggtccacatcctctatgttggctccacgccgctgaaatccaccttccga
ggcaccatacggagagaagatatccgagccacggagaaggataaggtagaagtgtacaag
agcttccgccccagtgacatcgtcctggccaaagttatctccctgggggacgcgcagtcc
aactacctgctgagcacagcagagaacgagctgggcgtggtggtggcacgcagtgaggca
ggggtgcagatggtgcccatcagctggtgcgagatgcagtgcccacgcacacacaccaag
gagttccggaaggtggcccgggtgcagccccagttcctgcagacctaa
DBGET
integrated database retrieval system
