Passer montanus (Eurasian tree sparrow): 120502163 Help Entry 120502163         CDS       T07277                                  Symbol COL17A1 Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism pmoa  Passer montanus (Eurasian tree sparrow) Pathway pmoa04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:pmoa00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     120502163 (COL17A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  120502163 NCBI-ProteinID:  XP_039565256 LinkDB All DBs Position Unknown AA seq 1511 aa AA seqDB search MDSVTKKTRQDGSEVTERLITETVTTRLTSLPPKGGSSSGLKTSSHTGGSGVEKRSYTHG SSYVTSSGSGRLNSTSSSSSYRQAQSPSSTLTKSPGSTFERKTYVNRHATYEGSSSANSS PEFPRKDFASASTRGRSQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRS SSGTLPIPKKAVVETKMVTESSQSVSGTYDTTILNTALPSYMWSSTLPAGSSLGGYHNSS SLINAMSHSTGSVFGVPNNLAPSNHTLNAGLSSSSTVFGVQNNLSPSSSSATQNVTAAST AYGMKNNSQSNTMASAGVSASAGGTVLSSQGDDVLHKDCKFVLLEKEKAPAKEMELLVMT KDTGKVFSASNTGLSGGSFAEDTLKKEKQGFSSSYATDTGLKSDANGGLKSMPKRDKETY AEIRSGDAGGAIGSAPSWCPCGSCCSWWKWLLGLLLAWLFLLGLLFGLIALAEEVRKLKS RVEDLEKINGGLLAINQGNSKIEKDVSRVDFLHANSPSLTFPYENEESVWLMVKSRLNKE IERGYFRGERGERGEKGDMGIQGPKGDRGLPGVPGIPGPIGHAGPEGPKGQKGSMGEPGM EGPMGQRGREGLPGPRGEPGPPGFGEKGDRGKNQPGPPGPPGPPGSTGLKGLMGSPGPQG PPGPPGLQGFRGEAGLPGAKGEKGASGPPGPKGDQGEKGSRGMTGEQGSRGIPGPPGEPG AKGPAGQAGRDGQPGERGEPGLMGMPGARGPPGPTGDAGEPGLTGPQGPPGLPGNPGRPG AKGEPGAPGKVISAEGSSTITLPGPPGPPGPPGPTGPPGVPGPVGPAGLPGQQGPRGEKG SPGETVIETIRTEVSSLASQMLGDLQGRAGPPGPPGPPGESVQGPPGPRGPPGLPGPPGP PGRPGSSMSTSEAFFTGPPGPPGPPGPKGDQGERGPRGFTGEPGDPGLSAFSSHGERVTI QGPPGPPGPPGPKGDAGVPGAPGIPGASRGGSRQIQGPPGPPGPPGPPGPSGGSSQEIQQ YVTDYLKSDNVRHYFTGAQGPPGPPGPPGLITTADGMTLDYAELATRVMSYMTSSSGRYE SFSSSVSTTSLLYQELLDLLQREEIRQYLIGPRGPPGPPGPGGDGMSLSLDYDELTRRFI SYLSSSGMSIGLPGPPGPPGSPGISYSDLTAYLRNSEFSGVVGPPGPAGPPGPPGIPGSP GTSLEDISAYLQNVGYSSLSGVRGPPGPPGPPGPPGFSGTGLLSYADITNSDEFRSELIQ YLKSDEVRSYISGPPGPPGPQGPPGPKGDSGFVSGSMSSSYQGLRASEHLHGGSLGAEGS HGGSLGTGSSYGSSMSSRSSYHASVGSDGAYDASMGTDGAFDGLLTEEESHRRSAGSSRS YSNSFTGSLDYNELALRVSESLQSRGILQDLMSYTAQGPAGPPGPPGPPGISKVFAAYGN VTADLMDFFRTHGAIQGPPGEKGERGYRGPKGDPGPMGPPGRQGHRGPKGEKGEKGEQLY VGRRKRRAAGV NT seq 4536 nt NT seq  +upstreamnt  +downstreamnt atggattctgtaacaaagaaaacgaggcaagatggatcagaagttactgaaagacttatt acagagactgtaaccacaagactcacatccttgccacccaaaggagggagcagcagtggg ctcaaaacatcatcccacactggagggagtggagtggaaaagcggtcgtacacccatgga agcagctatgtcacctcaagtggaagtggtagattgaattcaacatcatcgtcctccagc tacagacaagcacagtctcccagctctactctcaccaaatcacctggctcaacatttgaa agaaaaacctatgtcaaccgccatgcaacatatgaagggagctccagtgccaactcttct cctgagtttcccagaaaagattttgcatctgcctctacgagagggagaagccaaagccga gagagtgaaatacgagtccgactgcagagcgcatctccctctggcagatggacggagttg gatgatgtgaaacggttgctgaaaggaagtcgatctgccagctgcagccctactcggtca tcatccggtacactcccgataccgaaaaaggctgtggtggagacaaagatggtcactgag agctctcaatcagtgtcagggacatatgacacaaccatactgaatactgcgctcccttca tacatgtggtcctccactctgcctgctgggtcttcccttggtggataccataacagctct tccttgatcaatgccatgtctcactctacaggatcagtttttggtgttccaaataacctg gctcccagcaatcatactctgaatgcaggcctgagttcttcctctacagtatttggagtt caaaacaacctgtctccaagctcttcctctgcaactcagaatgttacagcagcctccaca gcatatgggatgaagaacaattctcagagcaacaccatggcaagtgctggtgtgtctgcc tcagcaggaggaactgttttgagctcccagggagacgacgttctgcacaaagactgcaag ttcgtgctgctagagaaggagaaggcacctgcaaaggagatggagctcttggtcatgaca aaggacactggcaaagtctttagtgcttctaacactgggcttagtggaggatcttttgca gaagacaccttgaagaaagagaagcagggattttcctcctcttatgctacagatactggc ctaaaatcagatgcaaatggagggctgaaatccatgccaaaacgggacaaagaaacttat gcagaaatacgaagtggtgatgcaggaggtgcaattggatcagcaccatcctggtgtccc tgtggttcctgctgtagctggtggaagtggctcctgggtttgcttctagcctggttgttt ctccttggattgctttttggactcattgctctggctgaagaagtgagaaagctgaaatct cgtgtggaagacctggaaaaaatcaatggtggcctcctggcaattaaccaagggaattca aaaatagaaaaggatgtttcaagagtagactttcttcacgcaaactcaccctccttgacc ttcccatatgaaaatgaagagtcagtctggttgatggtgaagagcagactgaataaggaa atagaacgaggctacttccgaggggagagaggagaacgtggtgagaaaggtgacatggga attcaaggtcccaaaggtgatcgaggacttcctggtgtcccaggcattcctggtccaatt gggcatgcaggaccagaaggaccaaaaggacagaagggaagcatgggtgagcctggcatg gaaggtcccatgggacaaagaggtagagaagggctcccagggcctcgaggggagccagga ccacctggatttggagaaaaaggagacagaggtaagaaccaaccaggtcctccagggcca cctggacccccaggttctactggcctaaaaggtctgatgggttctccaggcccacaaggt cctccaggtcctcctggcctacaaggatttagaggtgaagcaggactcccaggtgctaaa ggtgaaaaaggagccagtggaccccctggacccaaaggtgatcagggtgagaagggttct cgtggaatgacaggtgaacaaggctcaagaggaatacctggacctccaggagagccaggg gctaaaggacctgcaggacaagctggtcgtgatggacagccaggtgaaagaggtgaacca ggtcttatgggaatgccaggtgccagaggccctccaggacccactggagatgctggagag ccaggtcttacaggacctcaaggaccaccaggacttccaggcaacccaggccgaccaggg gctaaaggagaacctggagctccaggaaaagtcataagtgcagagggttcatcaacaatt actctgccaggcccaccagggcccccaggcccacctggccccactggtcctccaggtgtt ccaggtcctgttggaccagctggtctccctggacagcaaggtccacggggtgagaaggga tccccgggtgaaactgtgatagaaaccatcagaacagaagtctcatcattagcatctcaa atgctgggagatttacaagggcgagcaggaccaccaggtccccctgggccaccaggtgaa tctgtgcagggaccccctggacctcgtggtcccccaggattgccaggacctccaggccca ccagggagaccaggatcatccatgtccacctcagaagcattcttcacaggcccaccaggt ccaccaggaccaccaggcccgaagggagaccaaggagaacgaggtccacggggattcaca ggagaaccgggtgatcctggcctttcagcattctcctcccacggtgaaagagtcaccata cagggacccccaggcccacctggcccacctggaccaaaaggtgatgcaggtgtcccaggc gcacctggcatcccaggagcatctcgaggtggatccagacaaattcagggacccccagga cctcctgggccacctggtcctcctggcccaagtggaggttcatctcaagagattcagcag tatgtgactgactacctgaagagtgacaacgtcagacattatttcactggtgcccaaggc ccaccaggccctccaggcccacctggacttatcaccactgcagatgggatgaccttggat tatgcagagctggctacccgtgtcatgagctatatgacaagctcttcgggtcgctatgag tcattttctagctcagtatccactacatcccttttgtaccaagaacttctggacttgctg caaagggaagaaattcgtcagtatctcattggacctcggggcccaccgggacctcctggg ccagggggagatggaatgtctctgtcactggattatgatgagctgaccaggaggtttatc agctacttgtcaagttctgggatgagcattggactgcctggaccacctgggcctccaggg tcacctggcatatcttacagtgacctgacagcgtacctgagaaactctgaattcagtggt gttgttgggccccctggtcctgcaggccccccaggacctccagggatccctggatcacct ggcacctctctggaggacatctctgcctaccttcaaaatgttggatactcttccctttct ggagtccggggcccacctggccctcctggccctccaggaccaccaggtttctctggaacc ggcctcctgtcctatgctgacatcaccaacagcgatgagttcaggagtgagctgatccag tacctgaagagtgatgaagttcgaagctacatctcaggaccccctggaccccctgggcca cagggaccaccgggacccaaaggagacagtggctttgtgtctgggtctatgtcttcatca taccaagggttacgagcttctgagcacttgcatggaggatcccttggtgctgagggctcc cacgggggctcactgggcacaggcagctcgtatggcagctccatgagcagcagatcctct taccacgcctcagtgggcagtgatggcgcttacgatgcctccatgggcactgatggggct tttgacgggctgctgacagaggaggaatcacacaggagatcagcagggtcaagcagatcc tacagcaactccttcactggttccctggattacaatgagctggcactccgtgtgtcagag agcctgcagagtcgaggtattctccaggacctgatgtcttacacagcacagggacctgca ggtcccccaggccctcctggtcctcctggcatcagcaaggtctttgcagcctatggcaat gtcaccgctgacctcatggacttctttagaacacatggtgccatccaggggccacccggt gaaaagggagagaggggttatcgtggacccaaaggtgaccctgggccgatgggcccacca ggacgacaaggacacaggggaccaaaaggagagaagggagagaaaggtgaacaactttat gttggcagaagaaaaagaagagctgccggtgtttaa

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