Passer montanus (Eurasian tree sparrow): 120502435
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Entry
120502435 CDS
T07277
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoa03021
]
120502435 (TAF1C)
Transcription machinery [BR:
pmoa03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
120502435 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
120502435
NCBI-ProteinID:
XP_039565795
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MEFPAVLFPSYFGAGPPREEGGPSPVAGWGEHGQVLEGGPGRRQVQPAFVPLRGATGERW
EAGGAAAVPVLLPSAGCWIPSPAPQDILYHSGPGRKLRAGKSGATLDFAKQMGHFFVDHP
EDAFGSLGRLLHKNFYLGNAKLKRPARNSTIRMTALVEDINRLEARRGCPRQHLASRLRW
FSHLCRDWLFEVPLGLLADCLHEELMQQWSDLLFDDSLTGGALAWLPLPDRGTRTPVGRL
VHPGGQAMNHLYFQDVVLEELPHTRGSPAEFELSGRIRQVAAARVDGQDFVGVRSDYHCG
VWRVPAKRGAVPTVLQVIHTDVPASCLTVSPHLPGELSVCTQSGTVYLWNVETGLQQLRH
DPQTMFFRDHSPWRWSDFTAHPRVLTCADRTGLQCLDARAPKKCHFDLFKVGEEAGCQQG
ERVVLPMYLGRAHPSQYLVTTQFSVYVLDERLPLVPVLKWAHMMKAPPLFANVMPGKPGR
SHKVLLGASHTQELLLLQYRGGSQSACQLAGTPQKLHDMAGCLQHLPTQLPRRHHLLQQR
LSAPAAGLAATLQEDGPHKSMLVFQLSEAGDVFCQRLTHKAAQPPAPPSRDEATTAPGSS
PLFEAPASSPHALGSEGEEEEEQTFYLPNLEVIIHDEEEDMGTPAPLEEAELLQEPCASP
QPSPAVPSPAAALRYRRWLRALFRTWKEPPRHTWLPSLSQRRLFTRRDLQGTAGPSSLQR
QVRQRLRQTMQERGLIQRWEPLAIQPPPLPQTLELAEGLDPLSARLTAAWAGDWEQWWED
RTSFSVAQRQRALRERRRRQKRAKGRRSLSASFTSSLTYQSELSELSDVGPSLRSPGRPL
VLSQEGSPRAGSPPVHSLPPSPAPDEALLSSQSLRCRGIPKERRKTLRDYLSVWAEGPPE
PPEPLGSQASQLCIPSSQSQLCIPSSQSQLSSASQPRRKRPRMGF
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccggccgtgctcttcccctcctacttcggcgccggcccgccgcgggaagag
ggaggcccctcgccggtcgccggctggggcgagcacgggcaggtgctggagggtggcccc
ggccgccgccaggtgcagccggcgttcgtgcccctccgcggcgcgacgggcgaaaggtgg
gaagccggcggcgccgcggccgtgccggtgctgctgcccagcgcgggctgctggatcccc
tcgcctgcgcctcaggacatcctgtaccacagcggcccgggcaggaagctccgcgcaggc
aagtctggagccactctggacttcgccaagcagatgggccatttctttgtcgatcaccca
gaagatgcctttggctccctggggcgtctgctgcacaagaacttctacctgggcaatgcc
aagctgaagagaccagcccggaacagcaccatccggatgacggccctggtggaggacatc
aaccgcctggaggcccgacgcggctgcccccggcagcacttggcctcccgcctgcgctgg
ttctcccacctctgtcgtgactggctcttcgaggtgccgctggggctgctggcagactgc
ctgcacgaggagctgatgcagcagtggtccgacctgctctttgatgacagcctcactggg
ggagcactggcctggttgccccttccagacaggggaacacgaacacccgtgggccggctg
gtgcaccccggggggcaggccatgaaccacctctatttccaggatgtagtgctggaggag
ctgccccacacccggggctccccagctgagtttgagctcagcgggcgcatccggcaagtg
gccgcagcccgtgtggatgggcaagattttgttggggttcgctcagactatcactgtggt
gtttggagggtgccggccaagagaggggcagttcccacggtgctgcaggtgatccacact
gacgtgcctgcctcctgcctcactgtcagccctcaccttcccggggagctgtctgtctgc
acccagagcgggaccgtctacctctggaacgttgagactgggctgcagcagctgcgccat
gacccccagaccatgttttttcgggaccattcaccctggcgctggagtgacttcactgcc
cacccacgagtgctcacctgtgctgaccgcacgggcctgcagtgcctggatgcccgggcc
cccaagaaatgccactttgacttgttcaaggtgggcgaggaagctggctgccagcagggc
gagcgcgtggtgctgcccatgtacctgggcagggctcacccctcacagtaccttgtcacc
acccagttctccgtgtatgtgctggatgagcgtttgccactggtgccggttctgaagtgg
gcacacatgatgaaggctcctccactctttgcaaatgtgatgccagggaaacccgggagg
agccacaaggtgctgcttggtgcatcccacacacaggagctgttgcttttgcaataccgg
gggggcagccagtcggcctgtcagctggcagggactccgcagaagctgcacgacatggcg
gggtgcctgcagcacctgcccacccagctcccgcgccgccaccacctgctccagcagcgc
ctctcagccccagcagcggggctggctgctacgctgcaggaggatggaccacacaagtcc
atgctggttttccagctttctgaggctggggatgtcttctgccagaggctgacccacaag
gcagcacagccccctgcacccccatcgagggatgaggccacaacagcccctggctcttcc
cccctctttgaggctccagccagcagcccacatgccttgggcagtgagggagaggaggag
gaagagcaaacattctacttgcccaacctggaggtgattatccacgacgaggaggaggac
atgggcacaccagcacccctggaggaagctgaactgctgcaggagccctgtgccagccct
cagccctccccagcagtgcccagcccagctgcagccctgcggtaccgccgctggctgagg
gcccttttcaggacctggaaggagcctccgcggcacacctggctccccagcctcagccag
aggcgcctcttcacccgcagagatctgcaggggacagcaggccctagcagcctgcagagg
caggtgcgccagcggctgcgccaaaccatgcaggaacggggcctcatccagcgctgggag
cctttggccatccagccccctcccctgccacagactctggagctggcagagggtctggac
cccctaagtgcccgtctgacagcagcttgggctggggactgggagcagtggtgggaggac
aggacgagcttcagtgtggcgcagagacagcgggcgctgcgggagcggcggcggcggcag
aaacgggccaagggccgccgcagcctttcggccagcttcacctcctccctcacctaccag
tctgagctgtccgagctgagtgatgtgggcccctcgctgcgctctcccggccgcccactc
gttctctcccaggagggctcaccacgagcaggcagccccccagttcacagcctcccgccc
tcaccagcgcccgacgaagccctgctgtcttcacagagcctgcgctgccgtggcatcccc
aaagaacggcggaaaacgctgcgggactacttgtccgtgtgggccgagggcccccccgag
cccccagagccccttggcagccaggccagccagctgtgcatcccttcttcacagagccag
ctgtgcatcccttcttcgcagagccagctgtcctctgcttcgcagccccgccgcaagcgc
ccacgaatgggcttctga
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