Passer montanus (Eurasian tree sparrow): 120502549
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Entry
120502549 CDS
T07277
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoa03400
]
120502549 (SMC5)
DNA repair and recombination proteins [BR:
pmoa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
120502549 (SMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
JIP_LZII
AAA_25
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
120502549
NCBI-ProteinID:
XP_039565990
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MAAAAAREKGKAVKRAESNSPFVLGSIVRIFMKNFLTYTVCEVRPGPNLNVVVGANGTGK
SSIVCAICLGLAGKPAFLGRADKIGLFVKQGCMKGIVEIELFKSPDNIIITREIYVVNNA
SVWFINGKPATLRTVEEKIADLNIQVDNLCQFLPQDKVGEFTKLSKTELLEATEKSIGSP
EMYQFHCELKNFREKERELENLCREKTTSLEKMKQRVERYKQDVERYHECKRHVDLIEML
ERKRPWVEYENVREQHEEVKRCRNQAKKELKSLKEMQAPWTRRIQEAEENLNNLDIQTRD
VTAEIRNISQKCKEKQDALEMKDKQIEEINQAFRMKKDEETNRQKKIYQTQKIIEEWQNE
LDMMAVGENLQPQIDAVNTELKKLQEEKANIDNDISDLRAEKTNHEREEKRISDRLGQLN
NIMHMKEENLKMRFRDTHSALMWLRNNRDKFKKKTCEPMMLEINMKDSRHAKYVENHISS
NDMRAFVFECQEDMETFLVEVRDRQKLRVNAVCAPAESCAENLPLRPVEELHQYGFYSYL
RELFDAPPPVMSYLCSQYHVHNVPVGTQKTRDMIERVIQETNLRQMYTAEEKYVVKVSSY
TKQNLSSNTCLKEAQYLTSSVDTEERGQLENQRQDISNTLKSLDARLTALFDKQKLLDHK
DNKLRQEKKELLGRGNRRRQLESKIGVKYDSLRQLEQDAIDLEKEFQLANVKIKEINKQK
SELVTELKHLMKRIMPLNIVKVDLAFQMTRVTAEKNRLQSEYKEGTVQLRALQQRFHELD
NRKQLLYEKCMELMKQARQVCRLGPDQGFPEEFKVAFQTLPNTLEEIDAFLNEEKTRASC
FTGLSPSVVEEYNKQTQEIQQLTEYLEEKKNELNNYKQNISQVKEKWLNLLKVMIEQING
KFSKFFSSMQCVGEVDLHMENEEEYEKYGIRIRVKFHSSTELHELTPYHHSGGEKTVSTM
LYLMALQELNRCPFRVVDEINQGMDPMNERRVFEMVVETACKKRTSQYFLITPKLLQNLT
YNDKMTVLFVYNGPFMLETYKWNIKQFKRRQRHLSSMTES
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcgcgggaaaaggggaaagctgtgaagcgcgccgagtccaactcc
cccttcgtactgggctccattgtcaggatctttatgaagaactttttaacttacactgtc
tgtgaagtacgtccagggcccaacctgaacgtggttgtaggtgctaatggcacaggcaaa
tcaagcattgtttgtgccatctgcctgggactggctggaaaacctgctttcttaggccga
gctgataagatcggtctgtttgtgaagcaggggtgcatgaaaggcatagtggaaattgaa
ctgtttaagtcaccagacaatattatcatcacacgtgagatatatgtggtgaacaatgca
tcagtgtggtttatcaacggaaaaccagcaaccctgagaacagtagaagaaaaaattgca
gacttaaacatccaggtggacaatttgtgccaatttcttcctcaggacaaagtcggagaa
tttacaaaactgagtaagactgagttgctcgaagccactgaaaagtccattggttctcca
gaaatgtaccagtttcattgtgaactgaaaaatttcagagaaaaggaaagagaactagag
aacttgtgcagagaaaaaaccacctcattggagaaaatgaagcagagggttgaaaggtac
aagcaagatgttgaaagataccatgagtgcaagcgccatgtagacttaatagagatgctt
gagaggaaaaggccgtgggtggaatatgaaaatgttcgtgaacagcatgaagaagtgaaa
cgatgccgaaaccaagctaagaaagaattgaagagtctgaaagaaatgcaggccccatgg
acaagaagaatccaagaagctgaagaaaatttaaacaatctggatatacaaacaagagat
gttactgctgaaatcagaaatatttcccagaaatgtaaagagaaacaagatgctttggag
atgaaagataaacagattgaagaaattaatcaagcattcagaatgaaaaaagatgaagaa
acgaacaggcagaagaaaatataccaaactcaaaaaataatagaggagtggcagaatgag
ctggatatgatggcagttggtgagaatcttcagccacaaattgatgctgttaatactgag
ctgaaaaaattacaagaagagaaggcaaatattgataatgatatcagtgatctaagagca
gaaaaaaccaaccatgagcgggaagagaaaagaataagtgatcgccttggacaacttaac
aatataatgcatatgaaggaagagaaccttaaaatgagattccgagacacgcattctgct
cttatgtggctaagaaacaacagagacaagtttaaaaaaaaaacgtgtgaacccatgatg
cttgaaatcaatatgaaagacagtagacatgcaaaatacgttgaaaatcacatttcgtcc
aatgacatgagggctttcgtttttgagtgtcaagaagatatggagacatttctggtggag
gtgcgtgatcgtcagaaactaagagtgaatgctgtatgtgcacctgctgaatcatgtgct
gaaaatttacctttgaggcctgttgaagaattacaccaatacggattttattcatattta
cgagagttatttgatgctcctcctcccgtgatgagttatctttgttcccagtaccatgtt
cataatgttcctgtaggaacacagaagaccagagacatgattgaaagggtcatacaggaa
accaatctgaggcaaatgtatacagcagaagaaaaatatgttgttaaagtgtcttcttac
acaaaacaaaacctgtctagtaatacatgcttgaaggaggcacagtatctaactagttca
gtggatacagaggaaagaggacagctggaaaaccaacgacaggacatcagtaatacttta
aagtctttggatgcacgtttaactgcactgttcgacaaacagaaacttctggatcacaag
gacaataagctcaggcaagagaagaaggagcttttagggagaggaaaccggaggaggcag
ttggaatcaaaaattggtgtgaagtatgatagtttaagacagctggaacaagatgctatt
gacctagagaaggaatttcagctggcaaatgtaaagatcaaagaaataaataaacagaaa
tcagaacttgttactgaattgaagcatctcatgaagaggatcatgccattgaacatcgtc
aaagtagatttggcttttcagatgaccagggtgactgctgagaagaacagactacagtca
gagtacaaagaaggaactgtacagctaagagctctacagcaacgttttcatgaactggat
aataggaagcaacttctttatgagaagtgcatggaattgatgaaacaggctcgacaagtc
tgcagattgggtccggatcaaggttttccagaagaatttaaagttgcatttcagactctt
ccaaacacattggaggaaattgatgcttttctgaatgaagagaaaaccagggcttcctgt
ttcacaggcctcagtccttcggttgttgaagaatacaataagcaaacacaagaaatacaa
cagttaacagaatatctagaggagaagaaaaatgagttgaacaactataagcaaaacatt
tctcaggtcaaagaaaagtggctaaacctcttgaaagtgatgattgaacaaattaatgga
aagttcagtaagttctttagttctatgcagtgtgttggtgaagttgatcttcatatggaa
aatgaggaggagtatgagaagtatggaattcgcattagagtcaaattccacagtagcact
gaacttcatgaattgactccatatcatcatagtggaggtgagaaaactgtttccacgatg
ttatacctgatggctctgcaagaactcaacaggtgtcctttcagggttgttgatgaaata
aatcagggaatggatccaatgaatgagagaagagtttttgaaatggttgtggaaactgct
tgtaaaaaaagaacatctcagtacttccttattacaccaaagctcctgcagaatctcact
tacaatgacaagatgactgtgctgtttgtctacaatggaccttttatgctggagacatac
aaatggaacataaagcagtttaagagacggcaacggcacctttcaagcatgactgaatcc
taa
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