Passer montanus (Eurasian tree sparrow): 120502737
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Entry
120502737 CDS
T07277
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03020
RNA polymerase
pmoa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120502737 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
120502737 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoa03021
]
120502737 (POLR2B)
03400 DNA repair and recombination proteins [BR:
pmoa03400
]
120502737 (POLR2B)
Enzymes [BR:
pmoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120502737 (POLR2B)
Transcription machinery [BR:
pmoa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
120502737 (POLR2B)
DNA repair and recombination proteins [BR:
pmoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120502737 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
120502737
NCBI-ProteinID:
XP_039566372
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcagtatgatgaggacgatgatgaaatcacgcccgac
ctgtggcaggaagcctgctggattgttatcagctcatattttgatgaaaagggtttagtc
aggcaacagttggattcctttgatgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccaattgatttacaagctgaagcccagcatgcctcaggagaagtggaagag
ccaccccggtatctgttgaagtttgaacaaatctatctctccaaacctacacattgggaa
agagatggagcaccctcacctatgatgccaaatgaagccaggctgagaaacctcacgtat
tctgcccccttgtatgtggatataacaaaaacagttattaaagaaggggaggaccaattg
cagacccagcatcagaaaacctttataggaaaaattcctatcatgttgcgttccacgtac
tgtttgctgaatggcttaactgaccgtgatctttgtgagctgaacgagtgcccacttgat
cctggtggctacttcatcattaatggatcagaaaaggttctgattgctcaggagaaaatg
gctacaaacacagtgtatgtgtttgcaaagaaagactcaaaatatgcctacacaggagag
tgtagatcttgtctggaaaattcctctcgaccaacaagtactatatgggtcagcatgctg
gccagaggtggacagggtgcaaagaagagtgccatcggtcagcgcattgtagcaactctg
ccatatatcaaacaagaggtgcccatcatcattgtcttccgtgcactcggctttgtgtct
gacagggacattctagagcacatcatatatgattttgaagacccagaaatgatggaaatg
gtcaaaccatctctggatgaagcatttgtcattcaggagcaaaatgttgccctaaacttc
attggctcaagaggtgccaagccgggtgtcaccaaagaaaagagaatcaagtatgccaaa
gaagtgttgcagaaagaaatgctccctcatgttggtgtcagtgacttctgtgaaaccaaa
aaggcctattttctagggtatatggttcatagactgttgctggcagcactgggaagaaga
gagctggatgacagagatcattatggcaacaaaagactggatcttgctgggccactcttg
gctttcctgttcagaggaatgttcaagaatttgctgaaggaagtgagaatatatgcacaa
aagttcattgacagagggaaagatttcaacttggagttggcaattaaaacaagaattatt
tcagacggtttgaaatattcattggcaactggaaactggggtgaccagaagaaagctcat
caggccagagcaggagtatctcaggtgttgaaccgcctgacttttgcatccacactttcc
cacctgagacgcctgaattctccgattggtagagatggaaaactggccaagccccggcag
ctgcacaacaccctgtggggaatggtttgccctgctgagacccctgagggtcatgcagta
ggacttgtgaagaatttagccctgatggcttacatttctgtggggtcgcagccatcccca
attctggagttcttggaagagtggagtatggaaaacctagaagaaatatctccagcagca
atagctgatgctaccaagatatttgttaatggctgctgggtaggaatacacaaagatccg
gagcagctgatgaatacgctaaggaagcttcgtcgtcagatggacatcattgtgtctgag
gtctccatgattagagacattcgtgagcgagaaatccgcatctacactgatgcaggcaga
atttgtcggccccttttgattgtggagaagcagaagttgctgctgaagaaaaggcacatt
gaccaactgaaggaacgagagtataataattacagttggcaggatctcgtggccagtggt
gtggtagagtacattgacaccctggaagaagagactgtgatgctggcaatgactccagat
gacttgcaagagaaaggtgtggcatattgttcaacatacacacactgtgagattcaccca
tccatgatcctgggagtgtgtgcatctattatccctttccctgatcacaaccagtctccc
aggaacacataccagtctgctatgggtaaacaggctatgggagtctacatcaccaacttc
catgtccgtatggatacgctggcacacgtgctgtattatccccagaagcccctggtaaca
acacgctccatggagtacttgaggttcagagagttgccagcaggtatcaactcgattgta
gccattgcatcatacacaggctataaccaggaagactctgtcattatgaaccgttctgct
gttgacagaggctttttcaggtctgtgttctatcgctcatacaaagagcaggagtctaag
aaagggtatgaccaagaggaagtttttgagaagcctacacgtgaaacttgccaaggtatg
agacacgcaatctacgacaaacttgatgatgatggtttgatagcccctggggtacgtgtg
tctggggatgatgtcatcattggcaaaacagtcactctgccagaaaatgaagatgagctg
gaaagcaccaacaggcgcttcaccaagagagactgcagcaccttcctgcggaccagtgag
actgggattgtagaccaggtcatggtaaccctgaaccaggaagggtacaaattctgcaag
attagggtacgttctgtaagaattccacaaattggagataaattcgctagcagacacggt
cagaaaggaacctgtgggatccagtacaggcaagaggatatgcccttcacatgtgaaggc
atcacacctgatatcattatcaacccccatgccatcccttcccgtatgaccattggtcac
ttgattgagtgtcttcagggcaaggtgtctgcaaacaagggagaaattggtgatgctaca
ccttttaacgatgctgtcaacgtgcaaaagatttccaaccttttatcagattatggctat
catctgagaggaaatgaggtcctctacaatggcttcactggtcgaaaaatcacgtcccag
atcttcattggtcctacctattaccagcgcctgaagcacatggtggatgacaaaatccat
tctcgtgcacgagggccaatccagatccttaacagacagcccatggaaggcagatctcgt
gatggtggccttcgctttggagaaatggaacgagattgccagattgctcatggagcagcc
cagttcttgagagaaagattgtttgaagcttcagacccataccaggtccacgtgtgtaac
ctctgtggaatcatggcaattgcaaacacgaggactcacacctacgaatgccgcgggtgc
cgcaacaaaactcagatatctttggttcgaatgccctacgcctgcaagctcctcttccag
gaactgatgtctatgagtattgcacctcgtatgatgagtgtttag
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integrated database retrieval system
