KEGG   Passer montanus (Eurasian tree sparrow): 120503318
Entry
120503318         CDS       T07277                                 
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120503318 (PRPF38A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmoa03041]
    120503318 (PRPF38A)
Spliceosome [BR:pmoa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    120503318 (PRPF38A)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    120503318 (PRPF38A)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 120503318
NCBI-ProteinID: XP_039567694
LinkDB
Position
Unknown
AA seq 312 aa
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERIPSPDHRRRGYRDLDKPRRSPVVRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq 939 nt   +upstreamnt  +downstreamnt
atggccaaccgcacggtgaaggacgcgcacagcatccacggcaccaacccgcagtacctg
gtggagaagatcatccgcacgcgcatctacgagtccaagtactggaaggaggaatgcttc
ggcctcacggccgagctggtggtggacaaggccatggagctgaagtacgtggggggcgtc
tatggaggcaacattaaacccacgcccttcttgtgcctgacgctgaagatgctgcagatc
cagcccgagaaggacatcatcgtggagttcataaaaaacgaagacttcaagtatgtccga
atgcttggagcactgtacatgagactgacgggcactgccatcgactgctacaagtacctg
gaaccgctctacaacgactaccggaaaatcaaaagtcagaacagaaatggggaatttgag
ctgatgcacgtggatgaatttattgatgagctgctccatgaggaacgtgtttgtgacatc
atcctgcctcgactgcagaaacggtatgttctggaagaagctgagcaacttgagcctcgt
gttagtgctctggaggaagacatggatgatgtagaatctagtgaggaggaggaagaagaa
gatgaaaagctggaacggatcccatctcctgaccaccgcagaaggggctacagggacctg
gacaagccccgcaggtccccggtggtgcggtaccgccggagccggagccgctccccaagg
aggcgcagccgctctccgaagagaagaagcccatccccgcgccgggagcggcatcgcagc
aagagcccgagacggcaccggagcaggtcccgggagaggcgccacagatcgagatctaaa
tctccagggcatcatcgtagtcacagacacagaagtcattccaaatcacctgaaagatct
aagaagagtcacaaaaagagtcggcgagggaatgagtaa

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