Passer montanus (Eurasian tree sparrow): 120504293
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Entry
120504293 CDS
T07277
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120504293 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmoa01002
]
120504293 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmoa00536
]
120504293 (SHH)
Peptidases and inhibitors [BR:
pmoa01002
]
Cysteine peptidases
Family C46: hedgehog family
120504293 (SHH)
Glycosaminoglycan binding proteins [BR:
pmoa00536
]
Heparan sulfate / Heparin
Morphogens
120504293 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Vint
Motif
Other DBs
NCBI-GeneID:
120504293
NCBI-ProteinID:
XP_039569607
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEKGGTKLVKDLRPGDRVLVADTEGRLLYSD
FLTFLDREDGSHKLFYVIETRQPRARLLLTAAHLLFVAPQQNQSEAGAAGSRALFASRVR
PGQRVFVLGEGGRRLLPAAVHRVSLREEASGAYAPLTAQGTILIDRVLASCYAVIEEHSW
AHWAFAPFRLLQAVLAALGPSGEGSPMGDPTAPGIHWYSRLLYRIGSWVLDSDSLHPLGM
MVSSS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagctgaacgctctggcgatctcggtgatgaaccagtgg
cccggggtaaagctgcgggtaaccgagggctgggacgaggacggccaccactccgaggag
tccctgcactacgagggccgcgccgtggacatcaccacgtcggaccgggaccgcagcaag
tacggcatgctggcccgcctggctgtcgaggctggcttcgactgggtctactacgagtcc
aaggcgcacatccactgctccgtcaaagcagaaaactcagtggcggccaaatctgggggt
tgcttccctggctcggccacggtgcacctggagaaaggtgggaccaagctggtgaaggac
ctgcggcctggagaccgggtgctggtggccgacacggaaggccgtctgctctacagcgac
ttcctcaccttcctggaccgcgaggacggctcccacaagctcttctacgtcatcgagacc
cggcagccccgggcccggctgctgctgacggccgcccacctcctcttcgtggccccccag
cagaaccagtccgaggcgggcgccgccggcagccgggcgctgttcgccagccgcgtgcgg
ccgggccagcgcgtcttcgtgctaggcgagggcgggcggcggctgctgccggcggccgtg
caccgcgtgtcgctgcgggaggaggcgtcgggcgcctacgcgccgctcaccgcgcagggc
accatcctcatcgaccgcgtgctggcctcgtgctacgccgtcatcgaggagcacagctgg
gcgcactgggccttcgctcccttccgcctgctgcaggccgtgctggccgccctcgggccc
tccggggaggggtcgcccatgggagaccccacggcccccggcatccactggtactctcgg
ctcctctaccgcatcggcagctgggtgctggatagtgactctctgcacccgctgggcatg
atggtgtcatccagctga
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