KEGG   Passer montanus (Eurasian tree sparrow): 120504417
Entry
120504417         CDS       T07277                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03030  DNA replication
pmoa03410  Base excision repair
pmoa03420  Nucleotide excision repair
pmoa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120504417 (RFC4)
   03410 Base excision repair
    120504417 (RFC4)
   03420 Nucleotide excision repair
    120504417 (RFC4)
   03430 Mismatch repair
    120504417 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmoa03032]
    120504417 (RFC4)
   03036 Chromosome and associated proteins [BR:pmoa03036]
    120504417 (RFC4)
   03400 DNA repair and recombination proteins [BR:pmoa03400]
    120504417 (RFC4)
DNA replication proteins [BR:pmoa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    120504417 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    120504417 (RFC4)
Chromosome and associated proteins [BR:pmoa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    120504417 (RFC4)
DNA repair and recombination proteins [BR:pmoa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     120504417 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    120504417 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 AAA_lid_RFC1 Rad17 AAA_16 AAA_11 AAA_22 AAA_30 SLFN-g3_helicase Mg_chelatase DUF815 AAA_14 AAA_24 RuvB_N AAA_5 AAA_19 TIP49_C AAA_28 DNAX_ATPase_lid ResIII AAA_7 ParB
Other DBs
NCBI-GeneID: 120504417
NCBI-ProteinID: XP_039569824
LinkDB
Position
Unknown
AA seq 362 aa
MQAFLKGPASISTKPVAAKEKNASGSSGDGKKAKPIPWVEKYRPKNVDEVAFQDEVVAVL
KKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPDLFRQRVLELNASDERGIQVIREK
VKAFAQLTAAGSRSDGKMCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNY
ISRIIEPLTSRCSKFRFKPLSDSIQQQRLLDVSEKEHVKISNEAVSYLVKVSEGDLRKAI
TFLQSATRLMGGKEITEKIITEIAGVIPKETIDELLLGCQSGSFEKLEKLAKNLINEGFA
VAQLVNQLHDTIVESEDYSDKQKSAMVEKLAEVDKCLADGADEFLQLMSLCALVMQQLTQ
NV
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcaggccttcctcaagggcccggcctctatcagcaccaagcccgtcgctgccaaggaa
aagaacgcgtccgggagcagcggggatggcaagaaggccaaacccatcccctgggtggag
aaatatcgtcccaaaaatgtggatgaagttgcattccaggatgaagttgtagctgtgctg
aagaagtccctggaaggtgctgatcttcccaatctgttgttctatggcccacctggaact
ggaaagacttccactattttagcagctgcaagagaactgtttgggcctgatttattccgg
cagagagtccttgagctgaacgcgtctgatgagcgtgggatacaagtgatccgggagaaa
gtgaaggcttttgctcagctcacggcggctggaagccgttcagatggtaaaatgtgtcca
ccttttaaaattgtgatcctggatgaagcagattctatgacttcagcagcccaggcagcc
ttaagacgcacaatggaaaaagaatctaaaacaacacgtttctgtcttatttgtaactac
atcagcagaataattgaacctttaacatctcgatgctccaaattccgcttcaagcctttg
tctgacagtatccaacagcagaggctgctggatgtttctgagaaggaacatgtgaaaatc
agtaatgaggcagtgtcatacctggtgaaagtgtcagaaggggatttaagaaaagcaatt
acttttcttcaaagtgccactcgcctaatgggtgggaaggagatcacagagaagataatc
actgaaattgctggggtcatccctaaggaaacaattgatgaactgctattgggctgccag
agtggttcctttgagaaactggaaaaactggcaaagaatctcatcaatgaggggtttgct
gttgctcagcttgtaaaccagctgcatgacaccattgtggagagcgaagattacagcgac
aagcagaaatctgccatggtcgagaaacttgcagaagtggacaaatgcctggcagatggt
gctgatgaattcctgcagctgatgagtctctgtgcccttgtgatgcagcagctcacacag
aacgtctga

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